Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_031906.1
Length=198190
Score E
Sequences producing significant alignments: (Bits) Value
seq11692 87.8 2e-12
seq30076 84.2 3e-11
>seq11692
Length=22366
Score = 87.8 bits (96), Expect = 2e-12
Identities = 80/101 (79%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 19502 CCTGCTGACGAGCAGGAGACATTTTTATTCCTCTATAGCTCAATCGGCAGAGCATCTGAC 19561
||||||| ||| | || || | ||||| | |||||||| |||| |||||| ||||
Sbjct 13731 CCTGCTGTTGAGTAAGATACGTGCACATTCCGCGATAGCTCAGTCGGTAGAGCAAATGAC 13790
Query 19562 TGTTAATCAGAGGGTTCCTGGTTCGAGTCCAGGTGGAGGAG 19602
||||||||| |||| |||||||||||||||||| | ||||
Sbjct 13791 TGTTAATCATTGGGTCCCTGGTTCGAGTCCAGGTCGCGGAG 13831
>seq30076
Length=4501
Score = 84.2 bits (92), Expect = 3e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 19529 TTCCTCTATAGCTCAATCGGCAGAGCATCTGACTGTTAATCAGAGGGTTCCTGGTTCGAG 19588
|||| | |||||||| |||| |||||| ||||||||||||| |||| |||||||||||
Sbjct 3583 TTCCGCGATAGCTCAGTCGGTAGAGCAAATGACTGTTAATCATTGGGTCCCTGGTTCGAG 3642
Query 19589 TCCAGGTGGAGGAG 19602
||||||| | ||||
Sbjct 3643 TCCAGGTCGCGGAG 3656
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633836568762000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |