Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lycaon_20pictus_20[genbank_20GCA_5F001887905.1_202016-12-01] 803 sequences; 2,358,143,818 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq5 187 4e-45 seq3 156 7e-36 seq34 154 2e-35 seq36 78.8 1e-12 seq35 77.0 5e-12 >seq5 Length=63240551 Score = 187 bits (206), Expect = 4e-45 Identities = 196/253 (77%), Gaps = 11/253 (4%) Strand=Plus/Minus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 ||||||||||| | ||||| |||| | ||||||||||||||||||||||||||||||| | Sbjct 63237846 GTCAGTGTAGCACACGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-T 63237788 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC---CACCAACCATA 131 ||| || | |||||| | |||| | |||||||||||||| | | |||| || Sbjct 63237787 CAATCT-CGGGTGGCTGAATGCCACTTGTCCCTCTAAGAAGTTGGGGGACGCCAAGCACT 63237729 Query 132 GTCG----ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187 | | ||| ||| |||||| | | ||||| ||||||||||||||||||||||| Sbjct 63237728 CTGGGGTCATGTAACTAGTTAGCATGCCAGAGTCTCCTTCGTTATCGGAATTAACCAGAC 63237669 Query 188 AAATCACTCCACCAACTAAGAACGGCCATGC--ACCACCACCCATAGAATCAAGAAAGAG 245 ||||| ||||||||| |||||| ||||||| |||||| | |||| |||||||| Sbjct 63237668 AAATCGCTCCACCAAGTAAGAATAGCCATGCGTCACACCACTCGCGGAATTGAGAAAGAG 63237609 Query 246 CTATCAATCTGTC 258 |||||||| |||| Sbjct 63237608 CTATCAATGTGTC 63237596 >seq3 Length=74388519 Score = 156 bits (172), Expect = 7e-36 Identities = 181/238 (76%), Gaps = 16/238 (7%) Strand=Plus/Plus Query 31 TGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC---CTCAAACTTCCATTG 87 ||| |||| | |||| ||||||| ||||||||||||||| ||||| || | ||| Sbjct 26804700 TGCAGCCCCGGACATGTAAGGGCGACACAGACCTGTTATTTATTGCTCAATCT-CGGTTG 26804758 Query 88 GCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC---CACCAACCAT-----AGTCGATGG 139 |||| | |||| | |||||||||||||| | | |||| | ||||| || Sbjct 26804759 GCTGAATGCCACTTGTCCCTCTAAGAAGTTGGGGGACGCCAATCGCTTGGGAGTCG-TGT 26804817 Query 140 GGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCAC 199 ||| |||| | | | |||||||| |||||||||||||||||||||||| |||||| Sbjct 26804818 AACTACTTAGAATGACA--GTCTCGTTTGTTATCGGAATTAACCAGACAAATTGCTCCAC 26804875 Query 200 CAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGT 257 |||||||||| ||||| ||||||||||||| ||| || ||||||||||||||||| Sbjct 26804876 CAACTAAGAATGGCCAAGCACCACCACCCACGGAACTGAG-AAGAGCTATCAATCTGT 26804932 >seq34 Length=88915096 Score = 154 bits (170), Expect = 2e-35 Identities = 193/257 (75%), Gaps = 17/257 (7%) Strand=Plus/Plus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 ||||| ||| | | ||||| |||| | ||| ||| |||||||||||||||||||||| | Sbjct 63551230 GTCAGCGTAACACACGTGCAGCCCTGGACACCTACAGGCATCACAGACCTGTTATTGC-T 63551288 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC-AGCCAC-CAACCAT-- 130 ||| ||| | ||||| | ||| | |||||||||||||| || || | ||| | Sbjct 63551289 CAATCTTGGGT-GGCTGAACACCATTTGTCCCTCTAAGAAGTTGAGGGACGCCACCCTCT 63551347 Query 131 -AGTCGATGGGG--CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187 || | || ||| |||||| || ||||| ||| |||||||||||||||| Sbjct 63551348 CAGGGGTTGCATAACTAGTTAGCATACCAAAGTCTCATTCATTATCGGAATTAACCA--- 63551404 Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 247 ||| ||||||||| |||| |||||||||||||||||| ||||||||||| |||| Sbjct 63551405 -AATTGCTCCACCAA----GAACAGCCATGCACCACCACCCAGGGAATCAAGAAAAAGCT 63551459 Query 248 ATCAATCTGTCCTCCCT 264 ||||||||||| |||| Sbjct 63551460 ATCAATCTGTCAACCCT 63551476 >seq36 Length=80974255 Score = 78.8 bits (86), Expect = 1e-12 Identities = 168/251 (67%), Gaps = 29/251 (12%) Strand=Plus/Minus Query 21 GTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 80 |||| ||| |||| | || | | ||||||||| ||||| | ||||||| ||| | || | Sbjct 27203956 GTAGGGCGTGTGCAGGCCCGGATATCTAAGGGTATCACTGGCCTGTTACTGC-TAAATCG 27203898 Query 81 TCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCGATGGG 140 | | | | | ||| | ||||||||| |||| | | | || || ||| || || Sbjct 27203897 TGGGTAGTTGAGCA-CCACTTGTCCCTCTATGAAGTCGGAAAACA--CAGAGTTGAGGGT 27203841 Query 141 GCTATT-------TAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193 ||| | ||||| | | ||||| || || | |||||||||||||||| ||| Sbjct 27203840 TCTAGTGACCAGTTAGCATGCCAGAGTCTCATTTGTGACCGGAATTAACCAGACAGATCC 27203781 Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTA----T 249 ||||| |||||| ||| |||||| ||||||||||||||||| | Sbjct 27203780 CTCCA--------------CCATGCGCCATGACCCATGGAATCAAGAAAGAGCTACTACT 27203735 Query 250 CAATCTGTCCT 260 | ||| ||||| Sbjct 27203734 CTATCAGTCCT 27203724 >seq35 Length=77559626 Score = 77.0 bits (84), Expect = 5e-12 Identities = 130/184 (71%), Gaps = 12/184 (7%) Strand=Plus/Plus Query 31 TGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCT 90 ||| |||| ||| ||||||| ||||||| | || ||||||| ||||||| | | || | Sbjct 17947544 TGCAGCCCTGAATGTCTAAGGACATCACAAATCTATTATTGC-TCAAACT-CTAGTGATT 17947601 Query 91 GGAAGCCAATAGTCCCTCTAAGAAGCC--AGCCACCAACCATAGTCGATGGGGCTAT--- 145 | | ||| | ||||||||||||||| || | ||||||| || | || ||| Sbjct 17947602 GAACACCACTTGTCCCTCTAAGAAGCTGGAGTCGCCAACCAC--TCAAGGGTCATATAAT 17947659 Query 146 ---TTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAA 202 |||||| | | || | | |||| | |||| ||||||||||||||||||| || Sbjct 17947660 TAGTTAGCATGCTTGAGTGTTACTTGTTACCAGAATAAACCAGACAAATCACTCCATTAA 17947719 Query 203 CTAA 206 | || Sbjct 17947720 CCAA 17947723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796793801643