Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lycaon_20pictus_20[genbank_20GCA_5F001887905.1_202016-12-01] 803 sequences; 2,358,143,818 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq37 262 7e-68 seq1 248 1e-63 seq29 241 2e-61 seq6 215 9e-54 seq4 172 9e-41 seq36 109 9e-22 seq23 102 1e-19 >seq37 Length=74325445 Score = 262 bits (290), Expect = 7e-68 Identities = 216/262 (82%), Gaps = 11/262 (4%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 || ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| Sbjct 884471 TCCTCAGTAGGGTAAAACTAACCTGTCTCATGACTGTCTAAACCCAGCTCATGTTCCCTA 884530 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||||| |||||||||||||||||| |||||||||||| ||| ||||||||||| | Sbjct 884531 TTAGTGAGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGGTAGGAAGAGCCAA 884590 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||| |||||||||||||| || || ||||| ||||||||||| |||||||| Sbjct 884591 CATCAAAGGATCAAAAAGCGAC-------TG---GCTTGACTGCCACAAGCTAGTTATCC 884640 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| |||||| | | ||| | | || | |||||||| ||| Sbjct 884641 CTGTGGTAACTTTTCTGACACCTC-CTCTTAAAACTCAAAAGGTCAGAAGGATCGTCAGG 884699 Query 271 CCACACTTTCATGGTTTGTATT 292 || |||||||||| |||||| Sbjct 884700 CCCTGCTTTCATGGTCTGTATT 884721 >seq1 Length=122647182 Score = 248 bits (274), Expect = 1e-63 Identities = 218/271 (80%), Gaps = 7/271 (3%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAG------CTCAC-G 83 ||||||||||||| |||||||||||||||| || |||||||||||| || | | Sbjct 99294080 TCATCAGTAGGGTTAAACTAACCTGTCTCACGATGGTCTAAACCCAATTAGGTCTAATTG 99294021 Query 84 TTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAA 143 |||||||||||| | |||||||| || | || |||| ||||||| |||||||||| Sbjct 99294020 TTCCCTATTAGTAGCTGAACAATGCAGTGGTTGGTGAATCCTGCTTCACAATGATAGGAA 99293961 Query 144 GAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCA 203 ||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||| Sbjct 99293960 GAGCCGACATCGAAGGATCAAAAGGCGATGTCGCTATGAACGCTTGGCTGCCACAAGCCA 99293901 Query 204 GTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGAT 263 |||||||||||||||||||||||| |||||| || | ||| | || ||||||| Sbjct 99293900 GTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAGGTTCAAAGGAT 99293841 Query 264 CGATAGGCCACACTTTCATGGTTTGTATTCA 294 | || || | |||||| || | |||||| Sbjct 99293840 CCTGAGACCCCGCTTTCACAGTCTCTATTCA 99293810 >seq29 Length=26524611 Score = 241 bits (266), Expect = 2e-61 Identities = 212/264 (80%), Gaps = 13/264 (5%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||||||| |||||||||||||||||| |||| ||||||||||||||| ||||||| Sbjct 524589 TCATCAGTAGG-TAAAACTAACCTGTCTCACCACGGCCTAAACCCAGCTCACCTTCCCTA 524531 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||||||||| |||| ||||||||| |||||||||||| |||| |||||||||| | Sbjct 524530 TTAGTGGGTGGACAACCCAACGCTTGGTGAATTCTGCTTCACAATGACAGGAAGAGCCAA 524471 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||| ||||||||||||||||||||||||||||||||| |||||||| || Sbjct 524470 CATTCAAGGATCAAAAAGCAACGTCGCTATGAACGCTT-----------GCCAGTTACCC 524422 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 |||| | |||||||||| |||||| || ||| | | || | |||||||| || Sbjct 524421 CTGTAGGAACTTTTCTGACACCTCCTGCTCAAAACCCCAAAGGTCAGAAGGATCGTGAGA 524362 Query 271 CCACACTTTCATGGTTTGTATTCA 294 || | |||||| ||| |||||||| Sbjct 524361 CC-CGCTTTCACGGTCTGTATTCA 524339 >seq6 Length=60963907 Score = 215 bits (238), Expect = 9e-54 Identities = 206/263 (78%), Gaps = 3/263 (1%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| | | || || |||||||||||||| ||| Sbjct 2750551 TCATCAGTAGGGTAAAACTAACCTGTCTCACCATGATCGAAGCCCAGCTCACGTTCTCTA 2750492 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||||| ||||| ||||| ||| |||||||||||| ||||||||||||||| | Sbjct 2750491 TTAGTGAACAAACAACCCAACCCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCCA 2750432 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 || ||||||||||||| | | ||| ||||| |||||| |||||||||||||| | Sbjct 2750431 CACTGAAGGATCAAAAATTGAGGCTGCTGTGAACTCTTGGCCACCACAAGCCAGTTACCA 2750372 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| |||||| || | ||| | || | ||||| | ||| Sbjct 2750371 CTGTGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAGGTC---AGGATTGTGAGG 2750315 Query 271 CCACACTTTCATGGTTTGTATTC 293 || |||||||| || ||| ||| Sbjct 2750314 CCGCACTTTCACAGTCTGTGTTC 2750292 >seq4 Length=72497890 Score = 172 bits (190), Expect = 9e-41 Identities = 192/255 (75%), Gaps = 15/255 (6%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG----TCATCAGTAGGGTAAAACTAACCTGT 56 |||||||||| ||||||| ||| || |||||||||||||||||||||||| Sbjct 62210082 TACTAAGCGGGATTACCAC---GGCAACACCACATCATCAGTAGGGTAAAACTAACCTAC 62210138 Query 57 CTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTA 116 | ||||| ||||||| ||||| |||| || | || ||||| |||||||||||| |||| Sbjct 62210139 C-CATGATGGTCTAACCCCAGGTCACCTTTCTTACCAGTGGATGAACAATCCAATGCTTG 62210197 Query 117 CCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCG 176 |||||||||||| ||||||||||||| | ||| ||||||| |||||||| | Sbjct 62210198 GGGAATTCTGCTTCATAATGATAGGAAGAGACAGTATCAGAGGATCATAAAGCAACACTG 62210257 Query 177 CTATGAACGCTTGGCTGCCACAAGCCAGTTA-------TCCCTGTGGTAACTTTTCTGGC 229 ||||||| ||||| |||||| ||||||| | |||||| |||||||| | Sbjct 62210258 TTATGAACCATTGGCCACCACAAACCAGTTATTTTGGTTATTAGTGGTAGCTTTTCTGAC 62210317 Query 230 ACCTCTAGCCTCAAA 244 |||||| || | ||| Sbjct 62210318 ACCTCTTGCTTAAAA 62210332 >seq36 Length=80974255 Score = 109 bits (120), Expect = 9e-22 Identities = 122/159 (77%), Gaps = 3/159 (2%) Strand=Plus/Plus Query 137 ATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCA 196 ||||||||| | |||| | |||||||||||| |||| | |||| |||| ||||||| ||| Sbjct 27206957 ATAGGAAGAACTGACA-CAAAGGATCAAAAAACAACCTTGCTAAGAACACTTGGCTACCA 27207015 Query 197 CAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAG-GGAC 255 ||||||||||| |||||| || ||||||| |||| | || ||| || || || | Sbjct 27207016 AGAGCCAGTTATCTCTGTGGCAATTTTTCTGATACCT-TCTGCTTAAAACTCAAGAGGTC 27207074 Query 256 TAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 ||| ||| ||||| |||||||||| | || ||||| Sbjct 27207075 AGAAGAATCCTGAGGCCCCACTTTCATGATATGCATTCA 27207113 >seq23 Length=91888778 Score = 102 bits (112), Expect = 1e-19 Identities = 82/99 (83%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 ||||||||||||||||||||||||||| ||| | |||||||||||| ||||||||| Sbjct 75378324 CATCAGTAGGGTAAAACTAACCTGTCTTGCGACAATATAAACCCAGCTCTTGTTCCCTAT 75378383 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTC 130 || | ||| |||||| || |||| |||||||||||| Sbjct 75378384 TACTAGGTAAACAATTAAAGGCTTGGTGAATTCTGCTTC 75378422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854393139168