Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lycaon_20pictus_20[genbank_20GCA_5F001887905.1_202016-12-01] 803 sequences; 2,358,143,818 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq37 87.8 3e-15 seq21 80.6 4e-13 >seq37 Length=74325445 Score = 87.8 bits (96), Expect = 3e-15 Identities = 91/116 (78%), Gaps = 4/116 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | | |||||| | ||||| | || | || |||| || |||| Sbjct 884415 GTACGAGAGGAACCACAGG-TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGAAGCCAGT 884358 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTG--AACGCCTCTAAGTCAGAATCC 114 | | |||||||||||||| |||||| | ||| ||||||||||||||||||||| Sbjct 884357 GGGGTGAAGCTACCATCTGTGGGATTAGGACTGTGAACGCCTCTAAGTCAGAATCC 884302 >seq21 Length=41180981 Score = 80.6 bits (88), Expect = 4e-13 Identities = 68/84 (81%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 31 TTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGG 90 ||||| | || | || |||| || || || |||||||||||||||| |||||||| Sbjct 7904794 TTGGTGTATGTGCTTGGCTGAGGAGCCAATGGGGCGAAGCTACCATCTGTGGGATTATGA 7904853 Query 91 CTGAACGCCTCTAAGTCAGAATCC 114 ||||| |||||||||||||||||| Sbjct 7904854 CTGAATGCCTCTAAGTCAGAATCC 7904877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819193627392