Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq7708 140 6e-31 seq4565 107 4e-21 >seq7708 Length=123229 Score = 140 bits (154), Expect = 6e-31 Identities = 192/264 (73%), Gaps = 6/264 (2%) Strand=Plus/Plus Query 53 GTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTT 111 |||| ||| || ||| | | | |||||||| ||||||||||||||| |||||||||||| Sbjct 3674 GTGTCCCGTGGGGCCTGAAGCATTTACTTTAAAAAAATTAGAGTGTGCAAAGCAGGCCTG 3733 Query 112 TGCTC---GAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGG 168 ||| | |||| ||| |||||||| |||||||||| | ||||||||||||||| Sbjct 3734 AGCTGCCTGGATACCACAGCTAGGAATAATGGAATAGGACG-GTGGTTCTATTTTGTTGT 3792 Query 169 TTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCA 228 ||| | ||| | || ||||| | ||| | | |||| | |||| | | Sbjct 3793 TTTTCGGAACCAAGGCCATAATTAAGACGGACGGCCAGGGGCATTTATATTGCACCACTA 3852 Query 229 GAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGT 288 ||||||||||||||||| | ||||| || | |||||||| || |||| |||| Sbjct 3853 GAGGTGAAATTCTTGGACCGGTGCAAGACAGACCAGAGCGAAAGCATTTGTCAAGAATGT 3912 Query 289 TTTCATTAATCAGTGAACGAAAGT 312 |||||||||||| |||| ||||| Sbjct 3913 TTTCATTAATCA-AGAACAAAAGT 3935 >seq4565 Length=125941 Score = 107 bits (118), Expect = 4e-21 Identities = 184/261 (70%), Gaps = 17/261 (7%) Strand=Plus/Plus Query 61 GGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC---G 117 |||| ||| | |||| ||| ||||| ||||||||||||||||||||| || | Sbjct 112286 GGGACCCAAAGCGTTTAATTTCAAAAAGTTAGAGTGTTCAAAGCAGGCCCAAGCCACCTG 112345 Query 118 AATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGA 177 |||| ||| |||||||| ||||||||| || |||||| | |||||| || | Sbjct 112346 GATACCACAGCTAGGAATAATGGAATAGGAC-TG-GGTTCT-----GCTGGTTTTCAGAA 112398 Query 178 CC---GCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTG 234 || ||||| |||||| ||||| || ||||| | ||||| | |||| || Sbjct 112399 CCAAGGCCGT---GATTAAGAGGGACAGCTGGGGGCATTCGTATTGCACCACTAGAGATG 112455 Query 235 AAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCAT 294 ||||||||||| || |||| || | || ||||| || |||| |||||||||| Sbjct 112456 AAATTCTTGGACCCATGCAAGATGGACCAGAGCAAAAGCATTTGCCAAAAATGTTTTCAT 112515 Query 295 TAATCAGTGAACGAAAGTTAG 315 |||||| ||| |||||| || Sbjct 112516 TAATCA-AGAATGAAAGTCAG 112535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914350950656