Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq13280 105 3e-20
seq33536 102 3e-19
seq5134 87.8 7e-15
seq10633 86.0 3e-14
seq20892 84.2 9e-14
seq73 84.2 9e-14
seq35439 80.6 1e-12
seq15278 77.0 1e-11
>seq13280
Length=50216
Score = 105 bits (116), Expect = 3e-20
Identities = 109/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||||||||||||| | || ||| |||||| | | | ||| |||||||
Sbjct 50203 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATTTAAGGCTAAAT 50144
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| ||| |||| ||||| ||||||| || | ||||| ||||||| |||||| |
Sbjct 50143 ACCGGCACAAGACTGATAGTCAACAAGTACCGTAAGGGAAAGTTGAAAAGGACTTTGAAG 50084
Query 160 AGAGAGTTAAAAAGCACGTGAAA 182
|||||||| || || |||||||
Sbjct 50083 AGAGAGTTCAAGAGGGCGTGAAA 50061
>seq33536
Length=4287
Score = 102 bits (112), Expect = 3e-19
Identities = 116/156 (74%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 41 AGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATA 100
||| | |||| ||||||||||||| | || |||| |||||| | | ||||| ||||||||
Sbjct 704 AGTTGGGTTGCTTGGGAATGCAGCCCAAAGTGGGTGGTAAACTCCATCTAAGGCTAAATA 763
Query 101 TTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAA 160
||| |||||| |||| | | || || | ||||| ||||||| |||||| | |
Sbjct 764 CCGGCACGAGACCAATAGTCAATACATACCGTAAGGGAAAGTTGAAAAGAACTTTGAAGA 823
Query 161 GAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAA 196
||||||| || || |||||| |||| | ||| ||
Sbjct 824 GAGAGTTCAAGAGGGTGTGAAACTGTTAAGAGGTAA 859
>seq5134
Length=116349
Score = 87.8 bits (96), Expect = 7e-15
Identities = 99/133 (74%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
||||| |||| ||||||||||||| | || || |||||| | | ||||| |||||||
Sbjct 51718 GAGTCAGGTTGCTTGGGAATGCAGCCCAAAGCAGGTGGTAAACTCCATCTAAGGCTAAAT 51777
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| || |||||| |||| ||||||| | | ||||| |||||| |||||| |
Sbjct 51778 ACCAGCACGAGACCAATAGTCAACAAGTACCATAAGGGAAAGTAGAAAAGGACTTTGAAG 51837
Query 160 AGAGAGTTAAAAA 172
|||||||| ||||
Sbjct 51838 AGAGAGTTCAAAA 51850
>seq10633
Length=64552
Score = 86.0 bits (94), Expect = 3e-14
Identities = 100/134 (75%), Gaps = 2/134 (1%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC--TAA 97
||||| || | ||||||||||||| | || ||| |||||| | | ||||| || |||
Sbjct 11578 GAGTCAGGTAGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTATAA 11519
Query 98 ATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGG 157
||| |||| ||||||| || ||||||| || | ||||| ||||||| ||||||
Sbjct 11518 ATACTGGCACAAGACCGACAGTCAACAAGTACCGTAAAGGAAAGTTGAAAAGAACTTTGA 11459
Query 158 AAAGAGAGTTAAAA 171
| ||||| | ||||
Sbjct 11458 AGAGAGAATAAAAA 11445
>seq20892
Length=24776
Score = 84.2 bits (92), Expect = 9e-14
Identities = 72/89 (81%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 592 GCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGC 651
||||| |||| |||||||||||||||||||||||||| | |||||| ||| ||||
Sbjct 7245 GCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGAGGTCCATAGCGGTCCTGATGTGC 7304
Query 652 AAATCGATCGTCAAATTTGGGTATAGGGG 680
|||||| | ||| | ||||||||||||
Sbjct 7305 AAATCGGTTGTCTGACCTGGGTATAGGGG 7333
>seq73
Length=530958
Score = 84.2 bits (92), Expect = 9e-14
Identities = 97/131 (74%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
||||| |||| |||| |||||| | || | || |||||| | | ||||| | |||||
Sbjct 466416 GAGTCAGGTTGCTTGGAAATGCAACCAAAAGTAGGTGGTAAACTCCATCTAAGGTTAAAT 466357
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| |||| ||||||||||| ||||||| | | ||||| ||||||| |||||| |
Sbjct 466356 ACTGGCATGAGACCGATAGTTAACAAGTACTCTAAGAGAAAGTTGAAAAGAACTTTGAAG 466297
Query 160 AGAGAGTTAAA 170
| |||||| ||
Sbjct 466296 ACAGAGTTCAA 466286
>seq35439
Length=2652
Score = 80.6 bits (88), Expect = 1e-12
Identities = 71/89 (80%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||||||||||||| | || ||| |||||| | | ||||| |||||||
Sbjct 97 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGGGGTAAACTCCATCTAAGGCTAAAT 38
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTA 128
| ||| ||||||||||| |||||||
Sbjct 37 ACCGGCACGAGACCGATAGTCAACAAGTA 9
>seq15278
Length=42030
Score = 77.0 bits (84), Expect = 1e-11
Identities = 54/62 (87%), Gaps = 0/62 (0%)
Strand=Plus/Minus
Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628
|||||| | ||||||||||||||||||| | |||||||||||||||| ||| ||||||
Sbjct 26580 GGACCCAAGAGATGGTGAACTATGCCTGGGGAAGGTGAAGCCAGAGGAAGCTCAGGTGGA 26521
Query 629 GG 630
||
Sbjct 26520 GG 26519
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2078010040600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |