Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq7612 129 8e-28 >seq7612 Length=87096 Score = 129 bits (142), Expect = 8e-28 Identities = 179/249 (72%), Gaps = 20/249 (8%) Strand=Plus/Minus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| ||||||| ||||||||||| ||||| | |||||| | ||| | | || |||| Sbjct 85583 CTTAACCTTCCAGCACCGGGCAGGTGTCAGGCTGTATACGTGATCTTTCAATTTT-GCAC 85525 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 | ||||||||||| |||||||| || | |||||||||||| || || Sbjct 85524 AGCCCTGTGTTTTTGTTAAACAGTTGCCTGGACCTATTCTCTGCGCCCTCC--------- 85474 Query 121 ACACGTCGTTCACCAGCAGT-GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGA 179 ||| |||| | || || |||| || |||||||||||| ||| || |||||| | Sbjct 85473 ------CGT-CACCGG--GTAGGGACCCTTTATCCCGAAGTTACAGGGTCAATTTGCCTA 85423 Query 180 ATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGG 239 |||||||||| ||||| | | ||||| ||||| || ||| ||| || |||||| | Sbjct 85422 GTTCCTTAACCGTGATTCACTCAAGCGCCTGAGTATATTCAACCCGACTACGTGTGTCCG 85363 Query 240 TTTACGGTA 248 ||| ||||| Sbjct 85362 TTTGCGGTA 85354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 693775922756