Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq11178 129 1e-27
seq7612 78.8 2e-12
seq5854 77.0 6e-12
>seq11178
Length=62137
Score = 129 bits (142), Expect = 1e-27
Identities = 147/195 (75%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 39 AGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGG 98
|||||||||| ||||||||||| || | | | | |||||| | ||||| ||| |||
Sbjct 57039 AGGGTAAAACCAACCTGTCTCAGCACAGCCGGATACTAGCTCAAGCCCCCTACTAGCGGG 57098
Query 99 TGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA-TCGAA 157
||| ||| |||| |||| |||| ||||||| | |||||| ||| ||| |||| || ||
Sbjct 57099 TGAGCAACCCAAAGCTTGGTGAATACTGCTTCAGAATGATA-GAAAAGCTGACATTCAAA 57157
Query 158 GGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGT 217
|||||||| |||| ||||| | | | || ||| ||| ||||||||||||| |||
Sbjct 57158 GGATCAAACAGCAGGATCGCTGTAATCACTGGGCCATCACCAGCCAGTTATCCCAGTGAA 57217
Query 218 AACTTTTCTGGCACC 232
||| ||||| ||||
Sbjct 57218 CACTCTTCTGACACC 57232
>seq7612
Length=87096
Score = 78.8 bits (86), Expect = 2e-12
Identities = 123/175 (70%), Gaps = 6/175 (3%)
Strand=Plus/Minus
Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112
|||||||| |||| ||| |||||||||| ||| || ||| |||| ||||| |||||
Sbjct 86321 CTGTCTCACGACGTTCTGAACCCAGCTCGCGTGCCACTTTAATGGGCGAACAGCCCAACC 86262
Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169
||| ||| |||| | | | ||| || ||||||||||||| | |||| |
Sbjct 86261 CTTGGGACC---TTCTCCAGCCCCAGGATGTGACGAGCCGACATCGAGGTGCCAAACCCC 86205
Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224
||||| ||||| | ||||| | | |||| |||||||| | ||| |||||
Sbjct 86204 TCCGTCGATATGAGCTCTTGGGAGGGATCAGCCTGTTATCCCCGGAGTACCTTTT 86150
>seq5854
Length=106181
Score = 77.0 bits (84), Expect = 6e-12
Identities = 137/193 (71%), Gaps = 13/193 (7%)
Strand=Plus/Minus
Query 38 TAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGG 97
|||||||||||| | | ||| | || |||| | |||||||| | | | | ||||||
Sbjct 55795 TAGGGTAAAACTGTCTTACCTCCA-ATGGCCTAATCTCAGCTCACATCCTC-AGTAGTGG 55738
Query 98 GTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAG-GAAGAGCCGACATCGA 156
| ||||||| | | ||| ||| |||||||| | || ||||| || ||||| |
Sbjct 55737 GGGAACAATGCGGCACTTGATGAAGTCTGCTTC------ACAGCGAAGAACCAACATCTA 55684
Query 157 AG-GATCAAAAA-GCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGT 214
| | | ||| | || | ||||||||| ||||||| ||||| || |||||||||||
Sbjct 55683 AAAGCTGAAAGGTGGAA--TTGCTATGAACTCTTGGCTACCACATTCCGGTTATCCCTGT 55626
Query 215 GGTAACTTTTCTG 227
| ||| ||||||
Sbjct 55625 GATAATGTTTCTG 55613
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 853607356032
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |