Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq7612 168 1e-39 >seq7612 Length=87096 Score = 168 bits (186), Expect = 1e-39 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 112 GGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCG 171 ||||| ||| | ||| ||||||||||||| |||||||||| |||| ||||||||||| Sbjct 85941 GGACACTGTTTGGTGGGTAGTTTGACTGGGGTGGTCGCCTCCAAAAGCGTAACGGAGGCT 86000 Query 172 CCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGT 231 | |||| ||||||||| | ||| |||| | | | |||| || |||| ||||||| Sbjct 86001 TCTAAAGGTACCCTCAGAACGATTGGTAACCGTTCTTAGAGTGTAATGGCATAAGGGTGC 86060 Query 232 TTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTG 291 ||||||| || || |||||| | |||| | |||| | | || || |||||||| | | Sbjct 86061 TTGACTGGGAGACTAACAAGTCGATCAGGTAGGAAACTAGAGCATAGTGATCCGGTGTTT 86120 Query 292 CTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||| |||||| || | |||||| | ||||||||| ||| | ||||||| Sbjct 86121 CTGTATGGAAAGGACATCGCTCAAAGGATAAAAGGTACTCCGGGGATA 86168 Score = 143 bits (158), Expect = 5e-32 Identities = 211/298 (71%), Gaps = 13/298 (4%) Strand=Plus/Plus Query 29 TACGCCAGTATTCAAGGAGCCGCTGTTGGGATACTACCCCTGTTGTATTGGATTTCTAAC 88 |||||||||||| |||| |||||||| |||| ||| | |||| || ||||||| Sbjct 86809 TACGCCAGTATTTGTGGAGTCGCTGTTGAAATACGGCCCTTTGATTATTTGAGTTCTAAC 86868 Query 89 CGGACGACGTATAACCGTTGACGGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCG 148 | | |||| ||||| ||| | ||| ||||||||||||| ||||| Sbjct 86869 TCG-----------CTGTTGCGAGGACACTGTTTGGTGGGTAGTTTGACTGGGGTGGTCG 86917 Query 149 CCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCG- 207 ||||| |||| ||||||||||| | |||| | |||||| | ||| |||| ||| Sbjct 86918 CCTCCAAAAGTGTAACGGAGGCTTCTAAAGGTGCCCTCACGCCGATTGGTAACC-GGCGT 86976 Query 208 CACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAA 267 | |||| || |||| ||||| | ||||||| || || |||||| | |||| | |||| Sbjct 86977 TAGAGTGTAATGGCATAAGGGCGCTTGACTGGGAGACTTACAAGTCGATCAGGTAGGAAA 87036 Query 268 GTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAG 325 | | || || |||||||| | | | | |||||| || | |||||| | ||||||||| Sbjct 87037 CTAGAGCATAGTGATCCGGTGTTTCCGTATGGAAGGGACATCGCTCAAAGGATAAAAG 87094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981488607872