Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq7612 179 9e-43 >seq7612 Length=87096 Score = 179 bits (198), Expect = 9e-43 Identities = 147/179 (82%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 241 CAAAGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTC 300 |||| | ||||| || ||||||| || || |||||||||| ||||||||||| || | Sbjct 81459 CAAAAGGTGCTCCGACCGCTTGTAAGCGTATGGTTTCAGGAGCTATTTCACTCTTCTATT 81400 Query 301 CGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATT 360 || || |||||| |||||||||||||||||| |||||||||||||| || | |||||| Sbjct 81399 CGAAGTACTTTTCACCTTTCCCTCACGGTACTGGTTCACTATCGGTCTCTCGGGAGTATT 81340 Query 361 TAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 ||||||| |||||||||| || ||||| ||| | ||||||||||||||| |||||| Sbjct 81339 TAGCCTTACCGGATGGTCCCGGCAGATTCACACAGAATTTCTCGTGCTCCGTGCTACTC 81281 Score = 131 bits (144), Expect = 4e-28 Identities = 176/233 (76%), Gaps = 14/233 (6%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 || ||| |||| ||| || ||||||||| | |||||||||||||||||||||| ||| Sbjct 79122 CCTCAGTTCAT-CCGA-AAGTTTTTCAACACTTATCGGTTCGGTCCTCCAGTTAGT-GTT 79066 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 ||| |||| ||||||||| ||| ||| |||||| | || ||||| ||||| ||| | Sbjct 79065 ACCTAACC-TTCAACCTGACCA-AGGGTAGATCACTTGG-TTTCGCGTCTA-CTCCTACT 79010 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCT-----CCCCTATTCGGTTAAG 183 ||||| |||||||| |||||||||| ||||||| || || | |||| | |||| Sbjct 79009 GACTATACGCCCTATTAAGACTCGC-TTTCGCTTCGGCTACTTGCATCTATACAATTAA- 78952 Query 184 CTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCAC 236 | | |||| | | | ||| ||| | |||||| ||||||| |||| ||||| Sbjct 78951 CCTGGCCAGTAATAGTAACTCGTAGGTTCATTATGCAAAAGGCACGCCGTCAC 78899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1240448142848