Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= AAMG01001752.1
Length=400
Score E
Sequences producing significant alignments: (Bits) Value
seq48552 212 1e-52
>seq48552
Length=620
Score = 212 bits (234), Expect = 1e-52
Identities = 273/366 (75%), Gaps = 8/366 (2%)
Strand=Plus/Minus
Query 34 ACTCACCCAGGGCAGACAAACTTGACCCTGGAACCCTTGGATAATCGGCGGACGGGATTC 93
||| |||||||| ||| ||| | |||||||| |||||| | |||| |||||||
Sbjct 361 ACTAACCCAGGGAGGACGAACCTTCCCCTGGAAACCTTGGGTTTACGGCCTGAGGGATTC 302
Query 94 CCACCCGTCA-CACGCTACTCATGCCTGCATTCTCACTCGCATCAACTCCACCACACAGT 152
||||| ||| | ||||||||||||| ||||||| ||| ||| ||||| | | |
Sbjct 301 TCACCC-TCATCTCGCTACTCATGCCAACATTCTCTCTCCCATACTGTCCACAGCTCCTT 243
Query 153 CACCCGGCAGCTTCACCACTG-ACACGACGCTCCCCTACCCAACCACACAGGTTGCCACA 211
|| | |||||| | ||| | || ||||| ||||||| | | | | |||| |
Sbjct 242 -ACGGTACTGCTTCATC-CTGCATGGGAAGCTCCTCTACCCATC-ATATTTGATGCCGTA 186
Query 212 GCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAG 271
||||||| | || ||||||| | || ||||||| | |||||| ||||||||||
Sbjct 185 GCTTCGGTAGTATGTTTTAGCCCCGGAA-ATCTTCGGCGCAGGATCACTCGACCAGTGAG 127
Query 272 CTATTACGCACTCTTTCAAGGA-TGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCA 330
|||||||||||||||| || || |||||||||| |||||||| ||||||||||||| |||
Sbjct 126 CTATTACGCACTCTTTAAATGAATGGCTGCTTCTAAGCCAACATCCTGGTTGTCTATGCA 67
Query 331 ACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGT 390
| ||||||||||| ||||| | || || ||| |||||||||| | |||||||| |
Sbjct 66 ATCCCACATCCTTTACCACTTAACATACATTTTGGGACCTTAGCTGACGGTCTGGGCTCT 7
Query 391 TTCCCT 396
||||||
Sbjct 6 TTCCCT 1
Score = 86.0 bits (94), Expect = 1e-14
Identities = 90/116 (78%), Gaps = 2/116 (2%)
Strand=Plus/Minus
Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60
|| |||||||| ||||||| |||||| ||||||| |||||||| ||| ||| | ||
Sbjct 477 CGCCTACGCCTTTCGGCCTGAGCTTAGGTCCCGACTAACCCAGGGAGGACGAACCTTCCC 418
Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCA-CACGCTACTCAT 115
|||||| |||||| | |||| ||||||| ||||| ||| | ||||||||||
Sbjct 417 CTGGAAACCTTGGGTTTACGGCCTGAGGGATTCTCACCC-TCATCTCGCTACTCAT 363
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1176507516928
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |