Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq7612 107 1e-21 >seq7612 Length=87096 Score = 107 bits (118), Expect = 1e-21 Identities = 107/139 (77%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||| |||||||||| || |||||| || | ||||||||||||||| || Sbjct 86157 TACCTTTTATCCTTTGAGCGATGTCCTTTCCATACAGAAACACCGGATCACTATGCTCTA 86098 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||| | ||| || | ||||| |||| || |||||||| ||| ||||||| |||| | Sbjct 86097 GTTTCCTACCTGATCGACTTGTTAGTCTCCCAGTCAAGCACCCTTATGCCATTACACTCT 86038 Query 121 CACTACGATTTCCGACCGT 139 | ||| || || | ||| Sbjct 86037 AAGAACGGTTACCAATCGT 86019 Score = 95.1 bits (104), Expect = 9e-18 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 2 ACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTGC 61 ||||||||||| |||||||||| ||||||||| | | ||||||||||||||| || Sbjct 87096 ACCTTTTATCCTTTGAGCGATGTCCCTTCCATACGGAAACACCGGATCACTATGCTCTAG 87037 Query 62 TTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||| | ||| || | |||| |||| || |||||| | ||| ||||||| |||| Sbjct 87036 TTTCCTACCTGATCGACTTGTAAGTCTCCCAGTCAAGCGCCCTTATGCCATTACACT 86980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351693852400