Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= AAMG01002180.1
Length=500
Score E
Sequences producing significant alignments: (Bits) Value
seq7612 134 4e-29
>seq7612
Length=87096
Score = 134 bits (148), Expect = 4e-29
Identities = 114/139 (82%), Gaps = 1/139 (1%)
Strand=Plus/Plus
Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279
|||||||| | || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 67494 CTGAGAGGAAGGTCCCCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 67553
Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339
||||| ||||||||| |||||| | | || |||| |||| | | |||||| |||||
Sbjct 67554 CAGTGAGGAATATTGGTCAATGGACGAGAGTCTGAACCAGCCAAGTAGCGTGAAGGATGA 67613
Query 340 A-GGCCTTCGGGTCGTAAA 357
| | ||| |||| |||||
Sbjct 67614 ATGCCCTATGGGTTGTAAA 67632
Score = 118 bits (130), Expect = 3e-24
Identities = 175/246 (71%), Gaps = 4/246 (2%)
Strand=Plus/Plus
Query 22 GAGCGGCGGACGGGTGAGTAACGCGTGGGTAACCTGCCCTGTACACACGGATAACATACC 81
|| ||||| ||||||||||||| ||| ||||| || |||| ||||| | |
Sbjct 69886 GACCGGCGCACGGGTGAGTAACACGTATCCAACCTACCTATCACACGGGGATAGCTCTTC 69945
Query 82 GAAAG--GTATGCTAATACGAGATAATATACTTTTATCGCATGGTAGAAGTATCAAAGCT 139
||||| | || |||||| ||| ||||| ||||||| |||| | || ||| |||| |
Sbjct 69946 GAAAGAAGGAT--TAATACCTGATGATATAGTTTTATCTCATGATTTAACTATTAAAGAT 70003
Query 140 CCGGCGGTACAGGATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAA 199
|||| ||| | ||| ||||| ||||||| ||||||||||| |||||
Sbjct 70004 TTATCGGTGATAGATGGGGATGCGCTCCATTAGACAGTTGGTGAGGTAACGGCTCACCAA 70063
Query 200 GGCGACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTC 259
| ||||| ||| | |||||||| | || ||||||||||||||||||||||||
Sbjct 70064 ATCTACGATGGATAGGGGTTCTGAGAGGAAGGTCCCCCACATTGGAACTGAGACACGGTC 70123
Query 260 CAAACT 265
||||||
Sbjct 70124 CAAACT 70129
Score = 80.6 bits (88), Expect = 8e-13
Identities = 69/84 (82%), Gaps = 1/84 (1%)
Strand=Plus/Plus
Query 417 GCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAG 476
||||||||||||||||||||| ||| | ||||||||||||| ||| | ||| |||||
Sbjct 65138 GCCAGCAGCCGCGGTAATACGGAGGATCCGAGCGTTATCCGGATTTA-TTGGGTTTAAAG 65196
Query 477 GGTGCGTAGGTGGTTTCTTAAGTC 500
|||||||||| || | ||||||
Sbjct 65197 GGTGCGTAGGCGGACTGGTAAGTC 65220
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1496210646528
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |