Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq7708 134 3e-29 seq1051 111 3e-22 >seq7708 Length=123229 Score = 134 bits (148), Expect = 3e-29 Identities = 187/256 (73%), Gaps = 6/256 (2%) Strand=Plus/Plus Query 74 TCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGAT 132 |||||||||||| | ||| | |||| || | ||||| || |||||| |||| ||| Sbjct 4329 TCTTAGAGGGACAACTGGCATTCAGCCACCCGA-GATTGAG-CAGTAACAGATCTGGGAT 4386 Query 133 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACC 192 |||||||||||| | |||| ||| ||| ||||||||||| | || | | | | || Sbjct 4387 GCCCTTAGATGTCCAGGGCTGCATGCGTGCTACACTGACTGGCTCAGTGTGGGCCTTCCC 4446 Query 193 TTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCA 252 | ||||| ||| ||||| || || || | | || || ||||||| | | ||||| Sbjct 4447 TATGCCGGCAGGCGCAGGTAACCTGGTGAACCCCATTCATGATGGGGATCGGG--TTGCA 4504 Query 253 ATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTAC 312 |||| | | | | |||||||||| || ||||| | | ||||| || |||||||||| Sbjct 4505 ATTACTCCCCATGAACGAGGAATTCCAGGTAAGTG-GGGTCATAAGGTTGCGTTGATTAA 4563 Query 313 GTCCCTGCCCTTTGTA 328 |||||||||||||||| Sbjct 4564 GTCCCTGCCCTTTGTA 4579 >seq1051 Length=443299 Score = 111 bits (122), Expect = 3e-22 Identities = 181/256 (71%), Gaps = 6/256 (2%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | | ||| |||||||||||||||| Sbjct 393108 CTTCTTAGAGGGACAAGTGGCACTCAGCCACCTGA-GATCGAG-CAATAACAGGTCTGTG 393051 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | || || || || |||||||| | | || | | | | Sbjct 393050 ATGCCCTTAGATGTCCGGG---GCGCGTGCACTACACTGCCTGGCTCAGTGTGCGCCTAC 392994 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 || ||||| |||| || || | | || | | || || ||||||| | | ||| Sbjct 392993 CCCACGCCGGCAGGTGCAGGGAACCCACTGAACCCCATTCATGATGGGGATCGGGGTTTG 392934 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||| |||| | | | || ||||||| || |||||| | | ||||| ||| | ||||||| Sbjct 392933 CAACTATTCCCCATGAATGAGGAATTCCCAGTAAGTGTGGGTCATAAGCTTGTGTTGATT 392874 Query 311 ACGTCCCTGCCCTTTG 326 | ||||||| |||||| Sbjct 392873 AAGTCCCTGTCCTTTG 392858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946321263616