Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq7636 444 2e-122
seq5032 271 2e-70
seq325 187 8e-45
seq10814 143 9e-32
seq11531 75.2 4e-11
>seq7636
Length=87160
Score = 444 bits (492), Expect = 2e-122
Identities = 279/298 (94%), Gaps = 2/298 (1%)
Strand=Plus/Minus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||||||||||||||||||||| ||| ||||| | | ||||||||||||||||||
Sbjct 46570 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAA 46511
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |
Sbjct 46510 CAGGGTCTTCTTTCCCCACTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCACTGG 46451
Query 357 ATAGTAGATAGGGACAGTGG-GAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 415
||||||| |||| ||||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct 46450 ATAGTAGGTAGG-ACAGTGGAGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGAT 46392
Query 416 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTG 475
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 46391 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCTGCCGTTTACCCGCGCTTC 46332
Query 476 GTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 46331 ATTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 46274
>seq5032
Length=117940
Score = 271 bits (300), Expect = 2e-70
Identities = 234/287 (82%), Gaps = 2/287 (1%)
Strand=Plus/Plus
Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306
|| |||| | ||||||| ||||| | | | |||||||||||||| | | |||||||
Sbjct 6977 TTGTACATTTATCAAGTCTCTTCACTGAC-CAGTCTAGAGTCAAGCTCCATAAGGTCTTC 7035
Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366
| |||| |||||||| |||||| ||||||||| | ||| |||| ||||||||||| ||
Sbjct 7036 TGTCCCTGCTGATTCTACCAAGCGTGTTCCCTTGCCAGTGATTTCACTAGATAGTAGGTA 7095
Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426
|||||||||||| ||| || | |||||||||| ||||| ||||| ||| || |||||
Sbjct 7096 GGGACAGTGGGACTCTTATTCAACCATTCATGCATGTCACCAATTAAGTGATGAAGCATT 7155
Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486
|| |||||||||||||||||||||||| || | |||||| |||| ||||||||||
Sbjct 7156 TGATTACCTTAAGAGAGTCATAGTTACTGCC-ACATTTACCTCTGCTTCATTGAATTTCT 7214
Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||| |||||||||||||||| ||||||||||| |||||| |||||||
Sbjct 7215 TCAGTTTGACATTCAGAGCAGTGGGCAGAAATGACATTGTGTCAACA 7261
>seq325
Length=373959
Score = 187 bits (206), Expect = 8e-45
Identities = 183/234 (78%), Gaps = 3/234 (1%)
Strand=Plus/Minus
Query 287 TCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTG 346
||| | ||||||| ||||||| ||| | |||| |||||| | ||| ||||||||||
Sbjct 313036 TCATGTTCAACAG--TCTTCTTCACCCACAGATTTTGCCAAGTCA-TTCTCTTGGCTGTG 312980
Query 347 GTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCAC 406
|||| ||||| ||| || ||| || ||||| || || |||||||||||| | || |
Sbjct 312979 ATTTCATCAGATAATAGGTAAAGACGGTAGGAATATCATTCATCCATTCATGCACATCCC 312920
Query 407 TAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTAC 466
|||||||||| |||||| ||||||||||||||||| ||| |||||| || | |||||
Sbjct 312919 TAATTAGATGGTGAGGCACTTGGCTACCTTAAGAGAATCACAGTTACACCATCAATTTAC 312860
Query 467 CCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 520
| | |||| |||||||||| ||| ||||| ||||| ||||| ||| ||||||
Sbjct 312859 CTGAGCTTCAGTGAATTTCTTTACTATGACACTCAGAACACTGAGCAAAAATCA 312806
>seq10814
Length=128508
Score = 143 bits (158), Expect = 9e-32
Identities = 159/207 (77%), Gaps = 9/207 (4%)
Strand=Plus/Minus
Query 316 TGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG-ATAGTAGATAGGGACAGT 374
|||||| ||||||| ||| ||||| || || |||| ||| ||| | |||| || ||
Sbjct 330 TGATTCTGCCAAGCTAGTTGCCTTGACTATG-TTTCACTAATATACCGGGTAGGTACTGT 272
Query 375 GGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACC 434
||||||||| ||| |||||| | ||||| |||||||| | | ||||||||||||
Sbjct 271 GGGAATCTC----ATCTATTCATAGACATCACTGTTTAGATGATGGGACATTTGGCTACC 216
Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494
|| || ||||||| |||||||| | ||| | || ||||||||||||||||||
Sbjct 215 TT--GACAGTCATAATTACTCCCTATAAT-ACCTTCATTTCATTGAATTTCTTCACTTTG 159
Query 495 ACATTCAGAGCACTGGGCAGAAATCAC 521
|||||||||| ||||||||||||| ||
Sbjct 158 ACATTCAGAGTACTGGGCAGAAATTAC 132
>seq11531
Length=59410
Score = 75.2 bits (82), Expect = 4e-11
Identities = 52/59 (88%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 462 TTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 520
||||| | | ||| |||||||||| ||||||| |||||||||||||||||||||||||
Sbjct 7910 TTTACTCACACTTCATTGAATTTCTGCACTTTGCCATTCAGAGCACTGGGCAGAAATCA 7968
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1633682992256
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |