Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq7612 354 3e-95 >seq7612 Length=87096 Score = 354 bits (392), Expect = 3e-95 Identities = 425/567 (75%), Gaps = 34/567 (6%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTC-ACCACCTGATTGC 59 ||||||||| |||||| ||||||||| ||||| ||| |||||||| | | | | || | Sbjct 86084 TCGACTTGTTAGTCTCCCAGTCAAGCACCCTTATGCCATTACACTCTAAGAACGG-TTAC 86026 Query 60 CAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCA 119 ||| | ||||||| |||||| | ||||||||||| ||| ||||| | ||| ||||| Sbjct 86025 CAATCGTTCTGAGGGTACCTTTAGAAGCCTCCGTTACGCTTTTGGAGG-CGACCACCCCA 85967 Query 120 GTTAAACTACCCACCAGGCACTGTCCCC--AACCCAGATCATGGGCCAAGGTTAGATATC 177 || ||||||||||||| || ||||| | ||| || |||| ||||| | Sbjct 85966 GTCAAACTACCCACCAAACAGTGTCCTCGCAAC--------TG---CAAG-TTAGAAGCC 85919 Query 178 CACTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCAT 237 | || || | |||||||| ||| |||||||||| |||||||| | || ||| Sbjct 85918 AAATAATTAAAGGGCTGTATTTCACCAATGACTCCACAAGCACTAGCGCACCTGCTTCAA 85859 Query 238 AGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAGTGAAG 295 ||||||| ||||||||||||| || | | || | |||| |||||||||| ||| Sbjct 85858 AGTCTCCAGCCTATCCTACACATCAATTACCCAGATT--CAATGTTAAGCTATAGTAAAG 85801 Query 296 GTCC-CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTT 354 || | |||||||||||||||| |||| | || ||||||| || |||| |||||| Sbjct 85800 GTTCACGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTTCAATTT 85741 Query 355 CACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGGAAC 413 ||| | || ||||| ||||||| | || || |||| |||||||||||||||||||| Sbjct 85740 CACTGAGCTCGTGGTCGAGACAGT-GCCCAGATCATTACACCATTCGTGCAGGTCGGAAC 85682 Query 414 TTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGG 473 ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| Sbjct 85681 TTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGG 85622 Query 474 GGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCA 533 |||||||||| || || | || | | || |||||||||||||||| Sbjct 85621 GGCTTCAATTCAATGCTTC----------TCTTGCGATGACATCTCCTCTTAACCTTCCA 85572 Query 534 GCACCGGGCAGGCGTCAGTCCGTATAC 560 |||||||||||| ||||| | |||||| Sbjct 85571 GCACCGGGCAGGTGTCAGGCTGTATAC 85545 Score = 154 bits (170), Expect = 5e-35 Identities = 195/262 (74%), Gaps = 17/262 (6%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTC-ACCACCTGATTGC 59 |||||||||||||||| ||||||||| ||||| ||| |||||||| | | || | || | Sbjct 87024 TCGACTTGTAAGTCTCCCAGTCAAGCGCCCTTATGCCATTACACTCTAACGCCGG-TTAC 86966 Query 60 CAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCA 119 ||| | | |||||| |||||| | |||||||||||| ||| ||| ||| ||| ||||| Sbjct 86965 CAATCGGCGTGAGGGCACCTTTAGAAGCCTCCGTTACACTTTTGGA-GGCGACCACCCCA 86907 Query 120 GTTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCA 179 || ||||||||||||| || ||||| | || || | |||||| || | Sbjct 86906 GTCAAACTACCCACCAAACAGTGTCCTC--------GCAACAGCGA--GTTAGAACTCAA 86857 Query 180 CTACGGTCAGAGTG--GTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCAT 237 || ||| || | ||||||||||| ||||||||||| ||| |||| | || || Sbjct 86856 ATA--ATCAAAGGGCCGTATTTCAACAGCGACTCCACAAATACTGGCGTACCTGCTTCGA 86799 Query 238 AGTCTCCCACCTATCCTACACA 259 ||||||| ||||||||||||| Sbjct 86798 AGTCTCCGGCCTATCCTACACA 86777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1700820649472