Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= AAMG01002207.1
Length=564
Score E
Sequences producing significant alignments: (Bits) Value
seq7612 354 3e-95
>seq7612
Length=87096
Score = 354 bits (392), Expect = 3e-95
Identities = 425/567 (75%), Gaps = 34/567 (6%)
Strand=Plus/Minus
Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTC-ACCACCTGATTGC 59
||||||||| |||||| ||||||||| ||||| ||| |||||||| | | | | || |
Sbjct 86084 TCGACTTGTTAGTCTCCCAGTCAAGCACCCTTATGCCATTACACTCTAAGAACGG-TTAC 86026
Query 60 CAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCA 119
||| | ||||||| |||||| | ||||||||||| ||| ||||| | ||| |||||
Sbjct 86025 CAATCGTTCTGAGGGTACCTTTAGAAGCCTCCGTTACGCTTTTGGAGG-CGACCACCCCA 85967
Query 120 GTTAAACTACCCACCAGGCACTGTCCCC--AACCCAGATCATGGGCCAAGGTTAGATATC 177
|| ||||||||||||| || ||||| | ||| || |||| ||||| |
Sbjct 85966 GTCAAACTACCCACCAAACAGTGTCCTCGCAAC--------TG---CAAG-TTAGAAGCC 85919
Query 178 CACTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCAT 237
| || || | |||||||| ||| |||||||||| |||||||| | || |||
Sbjct 85918 AAATAATTAAAGGGCTGTATTTCACCAATGACTCCACAAGCACTAGCGCACCTGCTTCAA 85859
Query 238 AGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAGTGAAG 295
||||||| ||||||||||||| || | | || | |||| |||||||||| |||
Sbjct 85858 AGTCTCCAGCCTATCCTACACATCAATTACCCAGATT--CAATGTTAAGCTATAGTAAAG 85801
Query 296 GTCC-CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTT 354
|| | |||||||||||||||| |||| | || ||||||| || |||| ||||||
Sbjct 85800 GTTCACGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTTCAATTT 85741
Query 355 CACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGGAAC 413
||| | || ||||| ||||||| | || || |||| ||||||||||||||||||||
Sbjct 85740 CACTGAGCTCGTGGTCGAGACAGT-GCCCAGATCATTACACCATTCGTGCAGGTCGGAAC 85682
Query 414 TTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGG 473
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 85681 TTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGG 85622
Query 474 GGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCA 533
|||||||||| || || | || | | || ||||||||||||||||
Sbjct 85621 GGCTTCAATTCAATGCTTC----------TCTTGCGATGACATCTCCTCTTAACCTTCCA 85572
Query 534 GCACCGGGCAGGCGTCAGTCCGTATAC 560
|||||||||||| ||||| | ||||||
Sbjct 85571 GCACCGGGCAGGTGTCAGGCTGTATAC 85545
Score = 154 bits (170), Expect = 5e-35
Identities = 195/262 (74%), Gaps = 17/262 (6%)
Strand=Plus/Minus
Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTC-ACCACCTGATTGC 59
|||||||||||||||| ||||||||| ||||| ||| |||||||| | | || | || |
Sbjct 87024 TCGACTTGTAAGTCTCCCAGTCAAGCGCCCTTATGCCATTACACTCTAACGCCGG-TTAC 86966
Query 60 CAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCA 119
||| | | |||||| |||||| | |||||||||||| ||| ||| ||| ||| |||||
Sbjct 86965 CAATCGGCGTGAGGGCACCTTTAGAAGCCTCCGTTACACTTTTGGA-GGCGACCACCCCA 86907
Query 120 GTTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCA 179
|| ||||||||||||| || ||||| | || || | |||||| || |
Sbjct 86906 GTCAAACTACCCACCAAACAGTGTCCTC--------GCAACAGCGA--GTTAGAACTCAA 86857
Query 180 CTACGGTCAGAGTG--GTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCAT 237
|| ||| || | ||||||||||| ||||||||||| ||| |||| | || ||
Sbjct 86856 ATA--ATCAAAGGGCCGTATTTCAACAGCGACTCCACAAATACTGGCGTACCTGCTTCGA 86799
Query 238 AGTCTCCCACCTATCCTACACA 259
||||||| |||||||||||||
Sbjct 86798 AGTCTCCGGCCTATCCTACACA 86777
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1700820649472
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |