Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq20608 156 3e-33 seq2665 111 1e-19 seq7358 98.7 8e-16 >seq20608 Length=25523 Score = 156 bits (172), Expect = 3e-33 Identities = 592/913 (65%), Gaps = 21/913 (2%) Strand=Plus/Minus Query 61025 ATGAACCCCTATTGCAAGAGAATCCTC-GTCGTTTCGTATTGTTCCCCATCGAGTATGAG 61083 ||||||| ||| | |||| || ||| | ||||| || | || | ||||| || | Sbjct 9813 ATGAACCACTACT--AAGAAAAACCTTTGCCGTTTTGTCATCTTTCTTATCGAATACCAT 9756 Query 61084 GATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGAT 61143 |||||||||| ||||| || || ||| |||||||| ||| | | |||||||| | | Sbjct 9755 GATATTTGGCAGATGTATAAGAAAATGGAGGCTTCCTTTTGGGCAGCTGAGGAGGTGG-T 9697 Query 61144 TTGTCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCG-GTGAACA-ACATTTCATTA 61201 | || || ||||| | ||||||| || |||| | | | | | |||| || Sbjct 9696 CTCTCTAAGGACATTCAGCACTGGGAAGCCCTA--GAGCTTGAGGAGAGATATTTTATAT 9639 Query 61202 AACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAAC 61261 ||||| |||| |||||||| | || || || || ||||| || || |||| Sbjct 9638 CTCATGTTCTGGCTTTCTTTGCAACAAGTGATGGCATAGTAAATGAAAACTTGGTGGAGT 9579 Query 61262 GTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 |||| || || || || | | || || | |||||||| |||||||| ||||||| Sbjct 9578 GTTTTAGCCAAGAAGTTCAGATTACAGAAGCCCTCTGTTTCTATGGCTTCCAAATTGCCA 9519 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGG 61381 |||| || | | || || |||| ||| | ||||| || || ||||| | ||| Sbjct 9518 TGGAAAACATACGTTCTGAAATGTTTAGTCTCCTCATTGACACTTACATTAAGGACTCCA 9459 Query 61382 CGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGG 61441 ||| | || | ||||||||||| |||| ||| || || ||| ||| || | Sbjct 9458 AAGAAAGGAAATTTCTCTTCAATGCCATTGAGATGATGCCTCGTGTAAAGAAGAAGGCAG 9399 Query 61442 ATTGGGCCTTCAATTGGATCACCAGTACAA--CGGCTACATTTGGTGAACGATTGCTGGC 61499 ||||||| || |||||| || |||| |||||| | ||| ||||| || | || Sbjct 9398 ATTGGGCTTTGCCTTGGAT-TGGAG-ACAAAGAGGCTACCTGTGGAGAACGTGTGGTAGC 9341 Query 61500 ATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAA 61559 ||||| ||| || || | || || ||| || ||||| |||| || ||| | || Sbjct 9340 CTTTGCTACGGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCAATATTCTGGCTCAA 9281 Query 61560 GAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATG-AGTTGATATCACGCGACGAGG 61618 ||| | ||||| |||| ||||| || || ||||| | || || || | || | | Sbjct 9280 GAATCAAGGACTCGTGCCTGGTCTCACATTTTCCAATGAACTTATTAGCA-GAGATAAAG 9222 Query 61619 GCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGG 61678 | | || ||||| ||||| | | || |||| | ||| || | || | || Sbjct 9221 GTTTACACTGTGACTTTGCCTGCCCGATGTTTAAAC---ACCTGCTGCACAAACCTTTGG 9165 Query 61679 AGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTG 61738 || | | ||| || || | | | || | || |||||||| || || || | Sbjct 9164 AGCCGAGAGTGAAAGAAATCATCATCAATTCTGTTAGGATAGAACAGGAGTTCCTCACAG 9105 Query 61739 ACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAAT 61798 | || ||||| || |||| || |||||||| ||||| | |||||||||||| Sbjct 9104 AGGCCTTGCCAGTAAAGCTCACTGGGGTGAATTGTACTTTAATGAAGTAGTATATTGAAT 9045 Query 61799 TTGTTGCCGACCGTCTGTTGGTCGATTTGGGTAT--GAAGCGGATCTATAATACGAAAAA 61856 | || || ||| | || || | || ||| | | | | | | || | || |||| Sbjct 9044 TCGTGGCAGACAGACTTATGCTGGAGCTGGATTTTAGCAAGGTTTTTAGAGTA--GAAAA 8987 Query 61857 CCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACG 61916 || ||||| || ||||| | || || ||||| | ||||| || || || ||||| | Sbjct 8986 TCCTTTTGACTTTATGGAGACTATCTCCCTGGAAGTGAAGACTAACTTCTTTGAGAAGAG 8927 Query 61917 TGTAGGCGACTAT 61929 |||||| | ||| Sbjct 8926 AGTAGGCAAGTAT 8914 >seq2665 Length=168205 Score = 111 bits (122), Expect = 1e-19 Identities = 111/144 (77%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108 ||||||||| || ||||| |||||||| || ||||| || || |||| ||||| || Sbjct 87834 GGTATACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTTCCCAGGTTCTGCTG 87893 Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168 || ||||| ||||| || | ||| ||||| | ||||||||| || || ||||| || Sbjct 87894 GTTGCTCTTCCGATTACAGGAATCTTTGTAAAGCATGTACGGGGTACCTGTCTCTGTCTG 87953 Query 66169 GGACTCAATGATGGCGTGCCAAAG 66192 |||||||||||||| | |||||| Sbjct 87954 AGACTCAATGATGGCATACCAAAG 87977 >seq7358 Length=89575 Score = 98.7 bits (108), Expect = 8e-16 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329 ||||||||||| || | ||||| || |||||||| ||||| || ||| ||| |||||| Sbjct 38992 CAGGAGGTGCAGGTTCCAGAGGCTCGCTGTTTCTATGGCTTTCAAATTCTCATCGAGAAT 38933 Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 || ||||| |||||||||||| | || || || || |||||||| || Sbjct 38932 GTTCACTCAGAGATGTACAGTTTGCTAATAGACACTTACATCAGAGA 38886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397118486262080