Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq20608 156 3e-33
seq2665 111 1e-19
seq7358 98.7 8e-16
>seq20608
Length=25523
Score = 156 bits (172), Expect = 3e-33
Identities = 592/913 (65%), Gaps = 21/913 (2%)
Strand=Plus/Minus
Query 61025 ATGAACCCCTATTGCAAGAGAATCCTC-GTCGTTTCGTATTGTTCCCCATCGAGTATGAG 61083
||||||| ||| | |||| || ||| | ||||| || | || | ||||| || |
Sbjct 9813 ATGAACCACTACT--AAGAAAAACCTTTGCCGTTTTGTCATCTTTCTTATCGAATACCAT 9756
Query 61084 GATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGAT 61143
|||||||||| ||||| || || ||| |||||||| ||| | | |||||||| | |
Sbjct 9755 GATATTTGGCAGATGTATAAGAAAATGGAGGCTTCCTTTTGGGCAGCTGAGGAGGTGG-T 9697
Query 61144 TTGTCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCG-GTGAACA-ACATTTCATTA 61201
| || || ||||| | ||||||| || |||| | | | | | |||| ||
Sbjct 9696 CTCTCTAAGGACATTCAGCACTGGGAAGCCCTA--GAGCTTGAGGAGAGATATTTTATAT 9639
Query 61202 AACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAAC 61261
||||| |||| |||||||| | || || || || ||||| || || ||||
Sbjct 9638 CTCATGTTCTGGCTTTCTTTGCAACAAGTGATGGCATAGTAAATGAAAACTTGGTGGAGT 9579
Query 61262 GTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321
|||| || || || || | | || || | |||||||| |||||||| |||||||
Sbjct 9578 GTTTTAGCCAAGAAGTTCAGATTACAGAAGCCCTCTGTTTCTATGGCTTCCAAATTGCCA 9519
Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGG 61381
|||| || | | || || |||| ||| | ||||| || || ||||| | |||
Sbjct 9518 TGGAAAACATACGTTCTGAAATGTTTAGTCTCCTCATTGACACTTACATTAAGGACTCCA 9459
Query 61382 CGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGG 61441
||| | || | ||||||||||| |||| ||| || || ||| ||| || |
Sbjct 9458 AAGAAAGGAAATTTCTCTTCAATGCCATTGAGATGATGCCTCGTGTAAAGAAGAAGGCAG 9399
Query 61442 ATTGGGCCTTCAATTGGATCACCAGTACAA--CGGCTACATTTGGTGAACGATTGCTGGC 61499
||||||| || |||||| || |||| |||||| | ||| ||||| || | ||
Sbjct 9398 ATTGGGCTTTGCCTTGGAT-TGGAG-ACAAAGAGGCTACCTGTGGAGAACGTGTGGTAGC 9341
Query 61500 ATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAA 61559
||||| ||| || || | || || ||| || ||||| |||| || ||| | ||
Sbjct 9340 CTTTGCTACGGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCAATATTCTGGCTCAA 9281
Query 61560 GAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATG-AGTTGATATCACGCGACGAGG 61618
||| | ||||| |||| ||||| || || ||||| | || || || | || | |
Sbjct 9280 GAATCAAGGACTCGTGCCTGGTCTCACATTTTCCAATGAACTTATTAGCA-GAGATAAAG 9222
Query 61619 GCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGG 61678
| | || ||||| ||||| | | || |||| | ||| || | || | ||
Sbjct 9221 GTTTACACTGTGACTTTGCCTGCCCGATGTTTAAAC---ACCTGCTGCACAAACCTTTGG 9165
Query 61679 AGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTG 61738
|| | | ||| || || | | | || | || |||||||| || || || |
Sbjct 9164 AGCCGAGAGTGAAAGAAATCATCATCAATTCTGTTAGGATAGAACAGGAGTTCCTCACAG 9105
Query 61739 ACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAAT 61798
| || ||||| || |||| || |||||||| ||||| | ||||||||||||
Sbjct 9104 AGGCCTTGCCAGTAAAGCTCACTGGGGTGAATTGTACTTTAATGAAGTAGTATATTGAAT 9045
Query 61799 TTGTTGCCGACCGTCTGTTGGTCGATTTGGGTAT--GAAGCGGATCTATAATACGAAAAA 61856
| || || ||| | || || | || ||| | | | | | | || | || ||||
Sbjct 9044 TCGTGGCAGACAGACTTATGCTGGAGCTGGATTTTAGCAAGGTTTTTAGAGTA--GAAAA 8987
Query 61857 CCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACG 61916
|| ||||| || ||||| | || || ||||| | ||||| || || || ||||| |
Sbjct 8986 TCCTTTTGACTTTATGGAGACTATCTCCCTGGAAGTGAAGACTAACTTCTTTGAGAAGAG 8927
Query 61917 TGTAGGCGACTAT 61929
|||||| | |||
Sbjct 8926 AGTAGGCAAGTAT 8914
>seq2665
Length=168205
Score = 111 bits (122), Expect = 1e-19
Identities = 111/144 (77%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108
||||||||| || ||||| |||||||| || ||||| || || |||| ||||| ||
Sbjct 87834 GGTATACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTTCCCAGGTTCTGCTG 87893
Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168
|| ||||| ||||| || | ||| ||||| | ||||||||| || || ||||| ||
Sbjct 87894 GTTGCTCTTCCGATTACAGGAATCTTTGTAAAGCATGTACGGGGTACCTGTCTCTGTCTG 87953
Query 66169 GGACTCAATGATGGCGTGCCAAAG 66192
|||||||||||||| | ||||||
Sbjct 87954 AGACTCAATGATGGCATACCAAAG 87977
>seq7358
Length=89575
Score = 98.7 bits (108), Expect = 8e-16
Identities = 86/107 (80%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329
||||||||||| || | ||||| || |||||||| ||||| || ||| ||| ||||||
Sbjct 38992 CAGGAGGTGCAGGTTCCAGAGGCTCGCTGTTTCTATGGCTTTCAAATTCTCATCGAGAAT 38933
Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376
|| ||||| |||||||||||| | || || || || |||||||| ||
Sbjct 38932 GTTCACTCAGAGATGTACAGTTTGCTAATAGACACTTACATCAGAGA 38886
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397118486262080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |