Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq38969 143 5e-32 seq87762 109 9e-22 seq5723 87.8 3e-15 >seq38969 Length=11823 Score = 143 bits (158), Expect = 5e-32 Identities = 161/231 (70%), Gaps = 27/231 (12%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||| ||| ||| | || ||| | ||| || Sbjct 7066 TCATCAGTAGGGTAAAACTAACCTGTCTCAAGACAGTCCAAAACTAGTTCATGCTCCTTA 7007 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGA------------- 137 |||||||||||||||||||| | Sbjct 7006 TTAGTGGGTGAACAATCCAATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 6947 Query 138 --------------TAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAA 183 |||||||||||| ||| |||||||||||||| || |||||||||| Sbjct 6946 NNNNNNNNNNNNNNTAGGAAGAGCCGTCATTGAAGGATCAAAAAGTGACATCGCTATGAA 6887 Query 184 CGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTC 234 | |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 6886 CACTTGGCCACCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTC 6836 >seq87762 Length=8035 Score = 109 bits (120), Expect = 9e-22 Identities = 150/204 (74%), Gaps = 8/204 (4%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||| | ||||||||| ||| | ||| ||| | |||| |||||||||| ||| || Sbjct 4463 TCATCAAGATGGTAAAACTGTCCTATTTCACGACAGCCTAATCCCAGCTCACATTCT-TA 4521 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||| |||||| || ||| ||| | |||| |||| | ||| || |||| Sbjct 4522 TTAGTGG-TGAACATTCTAACACTTGATAACTTCTACTTC---ACAATA--AAAAGCCAG 4575 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||| ||| | ||||| | || ||| ||| | |||||| |||||| || |||||| Sbjct 4576 TATCTAAGAACTAAAAAATAGAGTTGCTGTGA-CACTTGGCCACCACAATCCTTTTATCC 4634 Query 211 CTGTGGTAACTTTTCTGGCACCTC 234 |||| |||||||||||| |||||| Sbjct 4635 CTGTAGTAACTTTTCTGACACCTC 4658 >seq5723 Length=121107 Score = 87.8 bits (96), Expect = 3e-15 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 157 AGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGG 216 ||||| ||||| |||| | | |||||| ||| |||| |||||||||| |||||||||||| Sbjct 23367 AGGATAAAAAAACAACATTGTTATGAATGCTGGGCTACCACAAGCCATTTATCCCTGTGG 23308 Query 217 TAACTTTTCTG 227 ||||||||||| Sbjct 23307 TAACTTTTCTG 23297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 852752101632