Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq71549 376 8e-102 seq38969 333 9e-89 seq127299 298 2e-78 seq92488 197 4e-48 seq97447 159 1e-36 seq136405 125 2e-26 >seq71549 Length=6799 Score = 376 bits (416), Expect = 8e-102 Identities = 237/255 (93%), Gaps = 1/255 (0%) Strand=Plus/Plus Query 279 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 338 |||||||||||||||||||||||||||||||||| |||| || ||||| ||| |||||| Sbjct 17 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCTGCTGTTTGGGCCAAACCC-TTCCCT 75 Query 339 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG 398 | |||||||||||| | |||| ||| ||||||| |||||||||||||| ||||||||||| Sbjct 76 TAGCTGTGGTTTCGGTGGATATTAGGTAGGGACTGTGGGAATCTCGTTCATCCATTCATG 135 Query 399 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCG 458 || |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 136 CGTGTCACTAATTAGATGATGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCG 195 Query 459 CCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAAT 518 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 196 CCGTTTACCCGCGCTTCATTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAAT 255 Query 519 CACATTGCGTCAACA 533 ||||| ||||||||| Sbjct 256 CACATCGCGTCAACA 270 >seq38969 Length=11823 Score = 333 bits (368), Expect = 9e-89 Identities = 260/306 (85%), Gaps = 11/306 (4%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCAC------AAAGT--CGGACTAGAGTC 288 |||||||||||||||||| ||||| ||| ||||| | || | ||||||||| Sbjct 6432 CTCCCACTTATTCTACACTTCTCATGTCCCTTCACCTCTTCATCGTGCCACACTAGAGTC 6373 Query 289 AAGCTCAACAGGGTCTTCTTT-CCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGG 347 ||||||| || ||||| |||| |||| ||||||||||||||||| ||||||||||||||| Sbjct 6372 AAGCTCA-CAAGGTCTCCTTTTCCCCACTGATTCCGCCAAGCCCCTTCCCTTGGCTGTGG 6314 Query 348 TTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACT 407 |||| || |||||||| | | ||||||||||||||| || |||||||||| | |||||| Sbjct 6313 TTTCTCTGGATAGTAGGTGGAGACAGTGGGAATCTCCTTCATCCATTCATTTGTGTCACT 6254 Query 408 AATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACC 467 |||||||||| |||| |||| ||||||||||||||||||||||||||||||| ||||||| Sbjct 6253 AATTAGATGATGAGGAATTTTGCTACCTTAAGAGAGTCATAGTTACTCCCGCTGTTTACC 6194 Query 468 CGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCG 527 | ||| ||||||||||||| |||||| ||||||||||||||||||||||||| | | Sbjct 6193 TACACTTCATTGAATTTCTTCATTTTGACGTTCAGAGCACTGGGCAGAAATCACA-TCCA 6135 Query 528 TCAACA 533 |||||| Sbjct 6134 TCAACA 6129 >seq127299 Length=31070 Score = 298 bits (330), Expect = 2e-78 Identities = 248/302 (82%), Gaps = 1/302 (0%) Strand=Plus/Minus Query 231 AAACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAA 290 ||| | ||||||||||| ||| |||||||| || ||||||| | | ||||| |||||| Sbjct 1412 AAAGGCCTCCCACTTATACTATACCTCTCACGTGTCTTCACAATGCCAGACTACAGTCAA 1353 Query 291 GCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTT 350 ||||||||||||||||||||| ||||| || | |||| || ||||||||||||||| Sbjct 1352 ACTCAACAGGGTCTTCTTTCCCTGCTGAATCTACTGAGCCTCTTTCCTTGGCTGTGGTTT 1293 Query 351 CGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAAT 410 | || |||| | | |||| ||| ||||||| | ||| ||| ||||||| || || ||||| Sbjct 1292 CACTGGATAATGGGTAGGAACATTGGGAATGTAGTTTATCTATTCATGTGCCTCGCTAAT 1233 Query 411 TAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACC-CG 469 || |||| || |||||||||||||||||||||||||||||||||| ||| ||| || | Sbjct 1232 TACATGAGAAGACATTTGGCTACCTTAAGAGAGTCATAGTTACTCCTGCCATTTTCCACC 1173 Query 470 CGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTC 529 | ||| |||||||||| ||||||||||||||||||| |||||| ||||||||| | || Sbjct 1172 CCCTTCATTGAATTTCTGCACTTTGACATTCAGAGCAATGGGCAAAAATCACATCACATC 1113 Query 530 AA 531 || Sbjct 1112 AA 1111 >seq92488 Length=42723 Score = 197 bits (218), Expect = 4e-48 Identities = 227/304 (75%), Gaps = 31/304 (10%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGT--CGGACTAGAGTCAAGCTC 294 |||||||||||| ||||||| | |||| | ||| || | || ||||||||||||| Sbjct 28361 CTCCCACTTATTATACACCTTTTGAGTCTCT--ACATTGTTCCAGAATAGAGTCAAGCTC 28418 Query 295 AACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT 354 | || | ||| ||| | |||||| ||||| | || |||| |||| |||| ||| Sbjct 28419 AGCACAGACTTTTTTTTCAT-TGATTCTGCCAAATCTCTTTCCTTAGCTGCAGTTTTGCT 28477 Query 355 AGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 414 |||||||| ||||||||||||||| ||| ||| ||||||||| || |||||||||| Sbjct 28478 AGATAGTATATAGGGACAGTGGGAGTCTTGTT----CATTCATGCAAGTAACTAATTAGA 28533 Query 415 TGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474 ||| ||| |||| ||| |||||||||||||| || | ||||| Sbjct 28534 TGATGAGTCATT----------AAGGGAGTCATAGTTACTTCCATCATTTAC-------- 28575 Query 475 GGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA- 533 ||||||||||||||||||||||||||||||| || ||||||||||||| |||||| Sbjct 28576 ---TGAATTTCTTCACTTTGACATTCAGAGCACTAGGTAGAAATCACATTGTTTCAACAC 28632 Query 534 TCAC 537 |||| Sbjct 28633 TCAC 28636 >seq97447 Length=9003 Score = 159 bits (176), Expect = 1e-36 Identities = 147/183 (80%), Gaps = 10/183 (5%) Strand=Plus/Minus Query 285 AGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTC----CCTTG 340 ||| ||||||||| |||||| |||| |||||| | ||||| | ||| ||||| Sbjct 5800 AGTTAAGCTCAACCAGGTCTT---TCCCTGCTGATACTGCCAAACTAGTTAGTTGCCTTG 5744 Query 341 GCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCG 400 |||||| |||| || |||| ||| |||||||||||||||||| ||| |||||||||| | Sbjct 5743 GCTGTG-TTTCACTGGATACTAGGTAGGGACAGTGGGAATCTTGTTCATCCATTCATAGG 5685 Query 401 CGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCC 460 | |||||| ||| |||| ||||||||||||||||| |||||||||| |||||||| | Sbjct 5684 CATCACTATTTAAATGATGAGGCATTTGGCTACCT--GGAGAGTCATAATTACTCCCTAC 5627 Query 461 GTT 463 ||| Sbjct 5626 GTT 5624 >seq136405 Length=28376 Score = 125 bits (138), Expect = 2e-26 Identities = 188/262 (72%), Gaps = 4/262 (2%) Strand=Plus/Plus Query 262 GTCATTTCACAAAG-TCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATT 320 ||| |||||| | | | || || || || | || |||| |||| ||| | | |||| Sbjct 26951 GTCTTTTCACCATGCTTGGTTTACAGACAGGTTCCACAGAGTCTCTTTTGCTCAAAGATT 27010 Query 321 CCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAAT 380 |||||| | ||| ||||||||||||||| ||||| || || ||| | | ||| Sbjct 27011 TTGCCAAGTCA-TTCACTTGGCTGTGGTTTCATCAGATATGAGGTAAATACAATAGCAAT 27069 Query 381 CTCGTTAATCCATTCATGCGCGTCACTAATT-AGATGACGAGGCATTTGGCTACCTTAAG 439 | || |||||||||| | ||| ||| || ||||| ||| |||||| ||||||||| Sbjct 27070 ACCATTCATCCATTCATACATGTCCCTATTTTAGATGGTGAGCCATTTGTCTACCTTAAC 27129 Query 440 AGAGTCATAGTTACTCCCGCCG-TTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACAT 498 ||| | || ||||| ||| |||||| ||| | ||| ||||||||||||||| Sbjct 27130 AGAATTATGGTTACACCCATAAATTTACCTAAGCTCCTATAAATATCTTCACTTTGACAT 27189 Query 499 TCAGAGCACTGGGCAGAAATCA 520 || || ||||||||| |||||| Sbjct 27190 TCTGATCACTGGGCAAAAATCA 27211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1632046157056