Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq9 132 7e-29 seq11 75.2 2e-11 >seq9 Length=27295742 Score = 132 bits (146), Expect = 7e-29 Identities = 173/234 (74%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||| ||||| ||||| ||| |||||| |||||| | Sbjct 4841455 GTACAAAGGGCAGGGACTTAATCAACAGAAGCTT-ATGACCCGCACTTACTGGGAATT-C 4841512 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 || ||| | | || || |||||| | || ||||||| || | ||||| | || Sbjct 4841513 CTTGTTCATGGGGAATAACTGCAATCCCCGATGCCCATCATGAATGGAGTTCAACGGGTT 4841572 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||| | ||||| |||| ||| | || | ||| |||||||||| || |||| Sbjct 4841573 ACCTGCACCTGCCGGCGTAGGGTAGGCACATGCTGAGCCAGTCAGTGTAGCACGTGTGCA 4841632 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | ||||||||||||||||||||||||||| || ||||| || ||||| Sbjct 4841633 GCCCCGGACATCTAAGGGCATCACAGACCTGTTACTG-CTCAATCTCGGGTGGC 4841685 >seq11 Length=26356634 Score = 75.2 bits (82), Expect = 2e-11 Identities = 54/61 (89%), Gaps = 1/61 (2%) Strand=Plus/Plus Query 173 GCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGG 232 |||||| |||| | |||||||||||||||||||||||| ||||| ||||||||| |||| Sbjct 9469184 GCGTGCAGCCCTGGACATCTAAGGGCATCACAGACCTGATATTG-CTCAAACTTGGGTGG 9469242 Query 233 C 233 | Sbjct 9469243 C 9469243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751943300845