Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq34 152 9e-35 seq243 113 8e-23 seq2 104 4e-20 >seq34 Length=14412233 Score = 152 bits (168), Expect = 9e-35 Identities = 204/278 (73%), Gaps = 7/278 (3%) Strand=Plus/Plus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTA-GAGTGT 97 ||| ||| ||| |||| ||| || ||| | | | |||||||||||||||||| |||||| Sbjct 12537771 TGCTCTTAGCTGAGTGTCCCGCGGGGCCTGAAGCGTTTACTTTGAAAAAATTAAGAGTGT 12537830 Query 98 TCAAAGCAGGCCTTTGCTC---GAATACATTAGCATGGAATAATAGAATAGGACGTGCGG 154 |||||||||||| ||| | |||| ||| |||||||| | ||||||| ||| Sbjct 12537831 TCAAAGCAGGCCCGAGCTGCCTGGATACCGCAGCTAGGAATAATGGGATAGGACCC-CGG 12537889 Query 155 TTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCA 214 ||||||||||||||||| | || | | |||||||| ||||| | |||||| | Sbjct 12537890 TTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGATTAAGAGGGACGGCCGGGGGCATTC 12537949 Query 215 GTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCG 274 ||| | | |||||||||||||||||| ||||| || | |||||||| Sbjct 12537950 GTACTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAGAGCGAAAGCA 12538009 Query 275 TTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 || ||||| |||||||||||||||| |||| ||||| Sbjct 12538010 TTTGCCAAGAATGTTTTCATTAATCA-AGAACTAAAGT 12538046 >seq243 Length=2386263 Score = 113 bits (124), Expect = 8e-23 Identities = 126/165 (76%), Gaps = 5/165 (3%) Strand=Plus/Minus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97 |||| ||| ||| |||| ||| | ||| | | | |||||||||||||||||||||| | Sbjct 51958 ATGCTCTTAGCTGAGTGTCCCGAGTGGCCCGAAGCATTTACTTTGAAAAAATTAGAGTCT 51899 Query 98 TCAAAGCAGGCCTTTG---CTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGG 154 ||||||||||||| | | | |||| ||| |||||||| ||||||||| ||| Sbjct 51898 TCAAAGCAGGCCTGAGCCACCTGGATACTGCAGCTAGGAATAATGGAATAGGAC-CACGG 51840 Query 155 TTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGA 199 ||||||||||||||||| | | || | | |||||||| ||||| Sbjct 51839 TTCTATTTTGTTGGTTTTTGGAACTGAGGCCATGATTAAGAGGGA 51795 >seq2 Length=40953715 Score = 104 bits (114), Expect = 4e-20 Identities = 134/181 (74%), Gaps = 8/181 (4%) Strand=Plus/Minus Query 135 TAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAAT 194 |||| ||||||||| ||||||||||||||||||||| | || | | |||||||| Sbjct 169057 TAATGGAATAGGACC-GCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGATTAAG 168999 Query 195 AGGGATAGTCGGGGGTGTCAGTATT---CAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 ||||| | |||||| | ||||| | | | |||||||||||||||||| Sbjct 168998 AGGGACGGCCGGGGGCATTCGTATTGCGCCACT---AGAGGTGAAATTCTTGGACCGGCG 168942 Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311 ||||| || | | |||||| || ||||| |||||||||||||||| ||||||||| Sbjct 168941 CAAGACGGACCAGAGGGAAAGCATTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAG 168883 Query 312 T 312 | Sbjct 168882 T 168882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915128769984