Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq23 329 6e-88 seq263 197 2e-48 seq102 143 5e-32 seq12 98.7 2e-18 >seq23 Length=16543041 Score = 329 bits (364), Expect = 6e-88 Identities = 250/294 (85%), Gaps = 1/294 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | |||||||| | | || ||||||||||||||||||||||||||||| Sbjct 1327869 TACTGAGCAGGATTACCATGGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 1327928 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | || ||||||| ||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1327929 ACGAGGGTCTAATCCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG 1327988 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| ||||||||||||| |||||||||||||||||||||| | ||||||| Sbjct 1327989 AATTCTGCTTCACAATGATAGGAAGAGACGACATCGAAGGATCAAAAAGCGATGTCGCTA 1328048 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||||||||||||||||||||||| |||||| || Sbjct 1328049 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCT 1328108 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | ||| | || | |||||||| ||||| | |||||| ||| ||||||| Sbjct 1328109 TAAAACCCAAAAGGTCAGAAGGATCGTGAGGCCCCGCTTTCACGGTCTGTATTC 1328162 >seq263 Length=2092701 Score = 197 bits (218), Expect = 2e-48 Identities = 185/234 (79%), Gaps = 1/234 (0%) Strand=Plus/Plus Query 2 ACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | | |||||||| | | | || | ||||||| ||||||||||||| | | Sbjct 1994775 ACTAAACAGGATTACCATGGCGACAACACATTATCAGTAAGGTAAAACTAACCCACCCTA 1994834 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||| |||||| |||||||||| ||| ||||||||| ||||||||||| || | || Sbjct 1994835 TGATCGTCTAATCCCAGCTCACCTTCTCTATTAGTGAACGAACAATCCAATGCCTGGTGA 1994894 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||| ||||| ||||||||||||| | ||||| ||||| || | |||||| | | ||| Sbjct 1994895 ATTCCGCTTCACCATGATAGGAAGAGACAACATCAAAGGACCATAGAGCAACATTGTTAT 1994954 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTC 234 ||||||||||| ||||||||||| ||||| |||||||||||||||| ||||| Sbjct 1994955 GAACGCTTGGCCACCACAAGCCAGCTATCCTTGTGGTAACTTTTCTGATACCTC 1995008 >seq102 Length=7317302 Score = 143 bits (158), Expect = 5e-32 Identities = 192/264 (73%), Gaps = 16/264 (6%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTT-CCCTA 90 || |||||| ||||||| ||||||||||| ||||||||||||| | ||| ||||| Sbjct 1340969 CAACAGTAGTGTAAAACA----TGTCTCATGACAGTCTAAACCCAGC--ATGTTTCCCTA 1340916 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||| | |||||||||||||| | || | |||| ||| ||||| |||||||| | Sbjct 1340915 TTAATAGGTGAACAATCCAATGATTGGTGGTTTCTTTTTCACAGTGATAAGAAGAGCCAA 1340856 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||| ||| |||||||||| || | |||||||| ||||| |||||||||| | | Sbjct 1340855 CATTGAAAGATCAAAAAGTGACATTGCTATGAATACTTGGTTGCCACAAGC-----AACT 1340801 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 || |||||| ||||| ||||| ||| ||| | || | ||| ||| ||| Sbjct 1340800 CTTTGGTAAGTTTTCCAACACCT----CCTGAAAACCTAAAGGTCAGAAGTATCATGAGG 1340745 Query 271 CCACACTTTCATGGTTTGTATTCA 294 || ||||| |||||| ||||| || Sbjct 1340744 CCCCACTTGCATGGTCTGTATCCA 1340721 >seq12 Length=25865670 Score = 98.7 bits (108), Expect = 2e-18 Identities = 103/133 (77%), Gaps = 2/133 (2%) Strand=Plus/Plus Query 161 TCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAAC 220 |||||| | |||||||| ||||| ||| |||||||||| ||||||||||||||||||| Sbjct 20204889 TCAAAATGTGACGTCGCTGTGAACACTTT-CTGCCACAAGGCAGTTATCCCTGTGGTAAC 20204947 Query 221 TTTTCT-GGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTT 279 |||||| |||||| || | ||| | | | ||||||| ||||| |||||| Sbjct 20204948 TTTTCTCTACACCTCCTGCTTAAAACCTAAAAAGTAAGAAGGATCACGAGGCCCCACTTT 20205007 Query 280 CATGGTTTGTATT 292 ||||||| ||||| Sbjct 20205008 CATGGTTCGTATT 20205020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854333502048