Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq243 82.4 8e-14 seq34 82.4 8e-14 >seq243 Length=2386263 Score = 82.4 bits (90), Expect = 8e-14 Identities = 80/101 (79%), Gaps = 4/101 (4%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTG---CTCGAATACATTACCAT 69 ||||||||||||||||||||| |||||||||||||| | | | |||| | | Sbjct 51922 TTTACTTTGAAAAAATTAGAGTCTTCAAAGCAGGCCTGAGCCACCTGGATACTGCAGCTA 51863 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 |||||||| ||||||||| |||||||||||||| ||||| Sbjct 51862 GGAATAATGGAATAGGAC-CACGGTTCTATTTTGTTGGTTT 51823 >seq34 Length=14412233 Score = 82.4 bits (90), Expect = 8e-14 Identities = 127/177 (72%), Gaps = 6/177 (3%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTA-GAGCGTTCAAAGCAGGCC---TTTGCTCGAATACATTACCA 68 |||||||||||||||||| ||| |||||||||||||| ||| | |||| | | Sbjct 12537806 TTTACTTTGAAAAAATTAAGAGTGTTCAAAGCAGGCCCGAGCTGCCTGGATACCGCAGCT 12537865 Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATG 128 |||||||| | ||||||| |||||||||||||| ||||| | ||| | | ||| Sbjct 12537866 AGGAATAATGGGATAGGAC-CCCGGTTCTATTTTGTTGGTTT-TCGGAACTGAGGCCATG 12537923 Query 129 ATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 || || | ||| | |||||| | ||| | | | |||||||||||||||| Sbjct 12537924 ATTAAGAGGGACGGCCGGGGGCATTCGTACTGCGCCGCTAGAGGTGAAATTCTTGGA 12537980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511961396320