Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq3 365 1e-98
seq12 242 1e-61
seq15 224 3e-56
seq115 178 4e-42
seq177 147 7e-33
seq4 98.7 3e-18
seq416 87.8 6e-15
seq29 86.0 2e-14
>seq3
Length=39231737
Score = 365 bits (404), Expect = 1e-98
Identities = 221/232 (95%), Gaps = 1/232 (0%)
Strand=Plus/Plus
Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 361
||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct 9225254 TCTACTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTTGCTGGATAGT 9225313
Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421
|| |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct 9225314 AGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCATCACTAATTAGATGACGAG 9225373
Query 422 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAA 481
|||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||
Sbjct 9225374 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCTG-TTACCCGCGCTTCATTGAA 9225432
Query 482 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
|||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 9225433 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 9225484
Score = 232 bits (256), Expect = 2e-58
Identities = 223/289 (77%), Gaps = 29/289 (10%)
Strand=Plus/Plus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||||| ||||| ||||||| | |||| || || | | | ||||||||||||| ||||
Sbjct 9438722 CTCCCACTCATTCTGCACCTCTTATGTCACTTTACCATGCCAGACTAGAGTCAAGTTCAA 9438781
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
||||||| ||||||| || ||||||||||||||||||| || |
Sbjct 9438782 CAGGGTCATCTTTCC------AT------------GTTCCCTTGGCTGTGGTTTTACTGG 9438823
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTA---G 413
|||||||||||||||||||||| ||| ||| | || | |||||||||| |
Sbjct 9438824 ATAGTAGATAGGGACAGTGGGACTCTTGTT--------CCTGAACATCACTAATTATTAG 9438875
Query 414 ATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCT 473
||| |||||||||||||||||| |||||||||||||||||||| ||||||| |||
Sbjct 9438876 ATGGTGAGGCATTTGGCTACCTTGAGAGAGTCATAGTTACTCCCATGATTTACCCAGGCT 9438935
Query 474 TGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACA 522
| ||||||||||||| ||||||||| ||| || ||| |||||||||||
Sbjct 9438936 TCATTGAATTTCTTCATTTTGACATTTAGAACATTGGCCAGAAATCACA 9438984
>seq12
Length=25865670
Score = 242 bits (268), Expect = 1e-61
Identities = 143/149 (96%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 344 GTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGT 403
||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct 23075779 GTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGT 23075838
Query 404 CACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTT 463
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 23075839 CACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCACCGTT 23075898
Query 464 TACCCGCGCTTGGTTGAATTTCTTCACTT 492
||||||||||| ||||||||||||||||
Sbjct 23075899 TACCCGCGCTTCATTGAATTTCTTCACTT 23075927
Score = 80.6 bits (88), Expect = 9e-13
Identities = 71/89 (80%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| || |||| ||||||| |||| |||| | ||||||||||||| ||||
Sbjct 20205055 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTATGTTACC 20205114
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAAC 95
||| |||| ||| | |||||||||||||
Sbjct 20205115 ATTTGACAGGTGTACTGCCCCAGCCAAAC 20205143
>seq15
Length=20492398
Score = 224 bits (248), Expect = 3e-56
Identities = 179/217 (82%), Gaps = 15/217 (7%)
Strand=Plus/Minus
Query 320 TCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAA 379
|| ||||| ||| ||||| || ||| ||||| || |||||||| |||||||| ||||||
Sbjct 15255972 TCTGCCAAACCCATTCCCCTGTCTG--GTTTCTCTGGATAGTAGCTAGGGACAATGGGAA 15255915
Query 380 TCTCGTTAATCCATTCATGCGCGTCACTAAT-------------TAGATGACGAGGCATT 426
||||||| ||||| ||||| || | |||||| ||||||||||||||||
Sbjct 15255914 TCTCGTTCATCCACTCATGTGCATTACTAATGTGCATTACTAATTAGATGACGAGGCATT 15255855
Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486
|||||||||| ||||||||||||||||||| ||| |||||| |||||| |||| ||||
Sbjct 15255854 TGGCTACCTTCAGAGAGTCATAGTTACTCCTGCCATTTACCTGCGCTTCACTGAACTTCT 15255795
Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACAT 523
|||||||||||||||||||||||||| ||||||||||
Sbjct 15255794 TCACTTTGACATTCAGAGCACTGGGCGGAAATCACAT 15255758
>seq115
Length=6755939
Score = 178 bits (196), Expect = 4e-42
Identities = 216/289 (75%), Gaps = 8/289 (3%)
Strand=Plus/Plus
Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTC-GGACTAGAGTCAAGCTCAA 296
||||||||| ||||||| || | ||| | || | ||| || || ||| ||||
Sbjct 789087 TCCCACTTAATCTACACTTCCTATGTCCCTGTACCATGTCAGGTTTACAGTT----TCAA 789142
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
||| ||||||||| || | | | | |||| ||||||||||||| ||||| ||
Sbjct 789143 CAGAGTCTTCTTTGACCACAGGTCTTTCTTAGCCA-TTCCCTTGGCTGTTGTTTCATCAG 789201
Query 357 ATAGTAGATAGGGACAGTGGGAA-TCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 415
||| ||| || |||||||| || | || || | |||||||||| | | ||||||||||
Sbjct 789202 ATAATAGCTAAAGACAGTGGAAAATATCATTCAGCCATTCATGCATGCCCCTAATTAGAT 789261
Query 416 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCC-GTTTACCCGCGCTT 474
| | ||||||||||| |||||||||||||| ||||| || || |||| | ||||||
Sbjct 789262 GGTGGAGCATTTGGCTATCTTAAGAGAGTCATGGTTACAACCACCAATTTATCTGCGCTT 789321
Query 475 GGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACAT 523
||||| | |||||||||||||||||| |||| |||| |||||||||
Sbjct 789322 CAGTGAATGTATTCACTTTGACATTCAGAACACTAGGCAAAAATCACAT 789370
>seq177
Length=4484908
Score = 147 bits (162), Expect = 7e-33
Identities = 124/150 (83%), Gaps = 2/150 (1%)
Strand=Plus/Minus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|| || ||||||||||||||||| ||| ||| | | | | |||||||||||| ||||
Sbjct 768603 CTTCCTCTTATTCTACACCTCTCGTGTCTCTTCCCCATGCCAGACTAGAGTCAAACTCA- 768545
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
|||| |||||||||||| ||||||| |||||||| | ||||||||||||||||||||| |
Sbjct 768544 CAGGATCTTCTTTCCCCACTGATTCTGCCAAGCCTGGTCCCTTGGCTGTGGTTTCGCTGG 768485
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTT 386
|| || ||| || ||||||||||| |||
Sbjct 768484 GGAG-AGGTAGAGATAGTGGGAATCTTGTT 768456
>seq4
Length=34388835
Score = 98.7 bits (108), Expect = 3e-18
Identities = 168/237 (71%), Gaps = 19/237 (8%)
Strand=Plus/Plus
Query 285 AGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTG 344
||| ||| ||||| ||||| || || |||||||| ||||||| ||| | | |||
Sbjct 19525629 AGTTAAGGTCAACCAGGTCT-CT---CCTGCTGATTCTGCCAAGCTAGTTGCTCTA-CTG 19525683
Query 345 TGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTC 404
|| | || ||| ||| |||| ||||||||||||| |||| ||||||||| |||
Sbjct 19525684 CTCTT-CACTGGATGCTAGGTAGGAACAGTGGGAATCTTGTTA-TCCATTCATAGAGGTC 19525741
Query 405 ACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTT 464
||| | |||| | |||| ||||||||| | | |||||| | ||||||| |
Sbjct 19525742 ACTGTTGAGATAATGAGGTATTTGGCTATCCT--GAGAGTTGTGGTTACTCTGA-----T 19525794
Query 465 ACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCAC 521
|||| | || ||| ||||||| ||||||| |||||||||||||| ||||
Sbjct 19525795 ACCCTCATTTCATTGGATTTCTT-----TGACATTTGAAGCACTGGGCAGAAGTCAC 19525846
>seq416
Length=461964
Score = 87.8 bits (96), Expect = 6e-15
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 38 TGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTC 97
|||| | ||||||||||||||||||| |||| |||| ||| ||||||||| |||||||
Sbjct 398950 TGAGCTCGCCTTAGGACACCTGCGTTACCGTTTGACAGGTGTACCGCCCCAGTCAAACTC 398891
Query 98 CCCACCTGACAATGTC 113
|||||||| || ||||
Sbjct 398890 CCCACCTGGCACTGTC 398875
>seq29
Length=15480060
Score = 86.0 bits (94), Expect = 2e-14
Identities = 49/50 (98%), Gaps = 0/50 (0%)
Strand=Plus/Plus
Query 484 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
|||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 14836806 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACA 14836855
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635072732384
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |