Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq133 107 2e-18 seq141 98.7 8e-16 seq17 87.8 1e-12 >seq133 Length=6340249 Score = 107 bits (118), Expect = 2e-18 Identities = 110/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108 ||||||||| || ||||| |||||||| || ||||| || || |||| ||||| || Sbjct 5009183 GGTATACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATTGTTCCCAGGTTCTGCTG 5009124 Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168 || ||||| ||||| || | || ||||| | ||||||||| || || ||||| || Sbjct 5009123 GTTGCTCTTCCGATTACAGGAGTCTTTGTAAAGCATGTACGGGGTACCTGTCTCTGTCTG 5009064 Query 66169 GGACTCAATGATGGCGTGCCAAAG 66192 |||||||||||||| | |||||| Sbjct 5009063 AGACTCAATGATGGCATACCAAAG 5009040 >seq141 Length=6018405 Score = 98.7 bits (108), Expect = 8e-16 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329 |||||||| || || | ||||| || |||||||| ||||| |||||| ||| |||||| Sbjct 2330160 CAGGAGGTACAGGTTCCAGAGGCTCGCTGTTTCTATGGCTTTCAGATTCTCATCGAGAAT 2330219 Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 || ||||| |||||||||||| | || || || || |||||||| || Sbjct 2330220 GTTCACTCAGAGATGTACAGTTTGCTAATAGACACTTACATCAGAGA 2330266 >seq17 Length=19722643 Score = 87.8 bits (96), Expect = 1e-12 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 61288 GAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTAC 61347 || || || |||||||| |||||||| ||||||||||| || |||| |||||||||||| Sbjct 6747044 GAAGCCCGCTGTTTCTATGGCTTCCAAATTGCCATGGAAAACATCCATTCGGAGATGTAC 6747103 Query 61348 AGTGTTCTCATCGATACGTACAT 61370 ||| | ||||| || || ||||| Sbjct 6747104 AGTCTCCTCATTGACACTTACAT 6747126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397530288563120