Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myotis_20brandtii_20[refseq_20GCF_5F000412655.1_202013-06-28]
169,750 sequences; 2,107,242,811 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq152401 174 2e-41
seq158305 158 2e-36
seq163693 156 6e-36
seq152801 149 9e-34
seq168516 93.3 6e-17
>seq152401
Length=6901723
Score = 174 bits (192), Expect = 2e-41
Identities = 182/234 (78%), Gaps = 4/234 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || ||||||| ||||| ||||| ||| |||||| |||||| |
Sbjct 4966694 GTACAAAGGGCAGGGACTTAATCAACGCAAGCTT-ATGACCCGCACTTACTGGGAATT-C 4966637
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||| | | || ||||||||| | ||||||||||||| ||||| | ||
Sbjct 4966636 CTCGTTCATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAATGGGTT 4966577
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||||| |||| |||| ||| | || || ||| ||||||||||||||||||
Sbjct 4966576 ACCCGCGCCTGCCGGCGTAGGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCA 4966517
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
|||| | |||||||||||||||||||||||||||||| ||||| || |||||
Sbjct 4966516 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 4966464
>seq158305
Length=1435
Score = 158 bits (174), Expect = 2e-36
Identities = 178/233 (76%), Gaps = 8/233 (3%)
Strand=Plus/Minus
Query 2 TACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCC 61
|||||||||||||||| || |||| ||||| ||||| ||| |||||| |||||| ||
Sbjct 1347 TACAAAGGGCAGGGACTTA----ACGCAAGCTT-ATGACCCGCACTTACTGGGAATT-CC 1294
Query 62 TCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TTA 120
||||| | | || ||||||||| | ||||||||||||| ||||| | |||
Sbjct 1293 TCGTTCATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAACGGGTTA 1234
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
|||| |||| |||| ||| | || || ||| |||||||||||||||||| |
Sbjct 1233 CCCGCGCCTGCCGGCGTAGGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAG 1174
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
||| | |||||||||||||||||||||||||||||| ||||| || |||||
Sbjct 1173 CCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 1122
>seq163693
Length=44555
Score = 156 bits (172), Expect = 6e-36
Identities = 169/219 (77%), Gaps = 4/219 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||| ||| ||||| |||||| || ||||| ||||||| |
Sbjct 553 GTACAAAGGGCAGGGACGTAATCAGCGCAAGCTT-ATGACTTGCACTTACCAGGAATT-C 496
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAA-ATTTCAAAGATT 119
|||||| | | || |||||||| | ||||| |||||| | || | || ||
Sbjct 495 CTCGTTCACGGGGAATAATTGCAAGCCCCGATCCCAGTCACGACGGTTATGACTCAGTTT 436
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGA-CTCGTTGAATACATCAGTGTAGCGCGCGTGC 178
||| ||| |||| | |||| | | |||| |||| | ||| |||||||| |||||
Sbjct 435 GCCCAACCCTTTCGGGCCAGGTTTCAAAACTCGCTGAAACCGTCATTGTAGCGCACGTGC 376
Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217
||||| | |||||||||||||||||||||||||||||||
Sbjct 375 GGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 337
>seq152801
Length=6144
Score = 149 bits (164), Expect = 9e-34
Identities = 178/236 (75%), Gaps = 7/236 (3%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || ||||||| ||||| ||||| ||| |||||| |||| |||
Sbjct 4144 GTACAAAGGGCAGGGACTTAATCAACGCAAGCTT-ATGACCCGCACTTACTGGGAA-TTC 4201
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
|||||| | | || ||||||||| | |||| |||||| ||| ||| | || |||
Sbjct 4202 CTCGTTCATGGGGAATAATTGCAATCCCCAATCCTCATCACAATG-GGTTTAACAGGTTA 4260
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGA---ATACATCAGTGTAGCGCGCGTG 177
||| ||||| | | ||| | || | ||| | |||||||||| ||| ||
Sbjct 4261 CCCACACCTGCCTGGGTAGGGTAGGCACACACTGAGCCACCAGTCAGTGTAGCACGCATG 4320
Query 178 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
| |||| | |||||||||||||||||||||||||||||| ||||| || |||||
Sbjct 4321 CAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 4375
>seq168516
Length=4961687
Score = 93.3 bits (102), Expect = 6e-17
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand=Plus/Plus
Query 161 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 220
|||||||||||||||||| |||| | |||||||||||||||||||||||||||||| |||
Sbjct 4420476 TCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTC 4420534
Query 221 AAACTTCCGTGGC 233
|| || |||||
Sbjct 4420535 AATCTCGGGTGGC 4420547
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 750763371250
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |