Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20brandtii_20[refseq_20GCF_5F000412655.1_202013-06-28] 169,750 sequences; 2,107,242,811 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq152401 174 2e-41 seq158305 158 2e-36 seq163693 156 6e-36 seq152801 149 9e-34 seq168516 93.3 6e-17 >seq152401 Length=6901723 Score = 174 bits (192), Expect = 2e-41 Identities = 182/234 (78%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||| ||||| ||||| ||| |||||| |||||| | Sbjct 4966694 GTACAAAGGGCAGGGACTTAATCAACGCAAGCTT-ATGACCCGCACTTACTGGGAATT-C 4966637 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | || ||||||||| | ||||||||||||| ||||| | || Sbjct 4966636 CTCGTTCATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAATGGGTT 4966577 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| |||| |||| ||| | || || ||| |||||||||||||||||| Sbjct 4966576 ACCCGCGCCTGCCGGCGTAGGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCA 4966517 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 4966516 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 4966464 >seq158305 Length=1435 Score = 158 bits (174), Expect = 2e-36 Identities = 178/233 (76%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 2 TACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCC 61 |||||||||||||||| || |||| ||||| ||||| ||| |||||| |||||| || Sbjct 1347 TACAAAGGGCAGGGACTTA----ACGCAAGCTT-ATGACCCGCACTTACTGGGAATT-CC 1294 Query 62 TCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TTA 120 ||||| | | || ||||||||| | ||||||||||||| ||||| | ||| Sbjct 1293 TCGTTCATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAACGGGTTA 1234 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 |||| |||| |||| ||| | || || ||| |||||||||||||||||| | Sbjct 1233 CCCGCGCCTGCCGGCGTAGGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAG 1174 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 ||| | |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 1173 CCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 1122 >seq163693 Length=44555 Score = 156 bits (172), Expect = 6e-36 Identities = 169/219 (77%), Gaps = 4/219 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| ||| ||||| |||||| || ||||| ||||||| | Sbjct 553 GTACAAAGGGCAGGGACGTAATCAGCGCAAGCTT-ATGACTTGCACTTACCAGGAATT-C 496 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAA-ATTTCAAAGATT 119 |||||| | | || |||||||| | ||||| |||||| | || | || || Sbjct 495 CTCGTTCACGGGGAATAATTGCAAGCCCCGATCCCAGTCACGACGGTTATGACTCAGTTT 436 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGA-CTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 ||| ||| |||| | |||| | | |||| |||| | ||| |||||||| ||||| Sbjct 435 GCCCAACCCTTTCGGGCCAGGTTTCAAAACTCGCTGAAACCGTCATTGTAGCGCACGTGC 376 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 ||||| | ||||||||||||||||||||||||||||||| Sbjct 375 GGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 337 >seq152801 Length=6144 Score = 149 bits (164), Expect = 9e-34 Identities = 178/236 (75%), Gaps = 7/236 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||| ||||| ||||| ||| |||||| |||| ||| Sbjct 4144 GTACAAAGGGCAGGGACTTAATCAACGCAAGCTT-ATGACCCGCACTTACTGGGAA-TTC 4201 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| | | || ||||||||| | |||| |||||| ||| ||| | || ||| Sbjct 4202 CTCGTTCATGGGGAATAATTGCAATCCCCAATCCTCATCACAATG-GGTTTAACAGGTTA 4260 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGA---ATACATCAGTGTAGCGCGCGTG 177 ||| ||||| | | ||| | || | ||| | |||||||||| ||| || Sbjct 4261 CCCACACCTGCCTGGGTAGGGTAGGCACACACTGAGCCACCAGTCAGTGTAGCACGCATG 4320 Query 178 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 | |||| | |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 4321 CAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 4375 >seq168516 Length=4961687 Score = 93.3 bits (102), Expect = 6e-17 Identities = 65/73 (89%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 161 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 220 |||||||||||||||||| |||| | |||||||||||||||||||||||||||||| ||| Sbjct 4420476 TCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTC 4420534 Query 221 AAACTTCCGTGGC 233 || || ||||| Sbjct 4420535 AATCTCGGGTGGC 4420547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 750763371250