Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20brandtii_20[refseq_20GCF_5F000412655.1_202013-06-28] 169,750 sequences; 2,107,242,811 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq163693 199 7e-49 seq158305 174 3e-41 >seq163693 Length=44555 Score = 199 bits (220), Expect = 7e-49 Identities = 195/246 (79%), Gaps = 4/246 (2%) Strand=Plus/Plus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGA 133 ||||||||||| ||||| ||||| ||||||||||||| ||| ||| | | ||||||| Sbjct 44113 TTTACTTTGAACAAATTTGAGTGCTCAAAGCAGGCCTGTGCCTGAAAATTCTTGCATGGA 44172 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGA-CCGCCGTAATGATTA 192 ||||| ||||||||| | |||||||||||||||||||| | ||| ||| |||||| ||| Sbjct 44173 ATAATGGAATAGGACTT-CGGTTCTATTTTGTTGGTTT-TCGGATCCGAAGTAATGGTTA 44230 Query 193 ATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG 252 | ||||| || |||||| | |||| ||| ||||||||||||||||||| Sbjct 44231 AGAGGGACAGACGGGGGCATTTGTATGGCGGTGTTAGAGGTGAAATTCTTGGATCGCCGC 44290 Query 253 AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 |||| |||||| |||||||| || ||||||||||||||||| ||| | || ||||||| Sbjct 44291 CAGACAAACTACAGCGAAAGCATTTGCCAAGGATGTTTTCATTGATCTG-GAGCGAAAGT 44349 Query 313 TAGGGG 318 || || Sbjct 44350 CAGAGG 44355 >seq158305 Length=1435 Score = 174 bits (192), Expect = 3e-41 Identities = 208/278 (75%), Gaps = 6/278 (2%) Strand=Plus/Plus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97 |||| ||| ||| |||| ||| || ||| | | | |||||||||||||||||||||||| Sbjct 419 ATGCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTACTTTGAAAAAATTAGAGTGT 478 Query 98 TCAAAGCAGGCCTTTGCTC---GAATACATTAGCATGGAATAATAGAATAGGACGTGCGG 154 |||||||||||| || | |||| ||| |||||||| ||||||||| |||| Sbjct 479 TCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAATAGGACC-GCGG 537 Query 155 TTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCA 214 ||||||||||||||||| | || | | |||||||| ||||| | |||||| | Sbjct 538 TTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGATTAAGAGGGACGGCCGGGGGCATTC 597 Query 215 GTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCG 274 ||||| | |||||||||||||||||| ||||| || | |||||||| Sbjct 598 GTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAGAGCGAAAGCA 657 Query 275 TTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 || ||||| |||||||||||||||| |||||||||| Sbjct 658 TTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 913646448000