Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myotis_20brandtii_20[refseq_20GCF_5F000412655.1_202013-06-28]
169,750 sequences; 2,107,242,811 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq163693 199 7e-49
seq158305 174 3e-41
>seq163693
Length=44555
Score = 199 bits (220), Expect = 7e-49
Identities = 195/246 (79%), Gaps = 4/246 (2%)
Strand=Plus/Plus
Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGA 133
||||||||||| ||||| ||||| ||||||||||||| ||| ||| | | |||||||
Sbjct 44113 TTTACTTTGAACAAATTTGAGTGCTCAAAGCAGGCCTGTGCCTGAAAATTCTTGCATGGA 44172
Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGA-CCGCCGTAATGATTA 192
||||| ||||||||| | |||||||||||||||||||| | ||| ||| |||||| |||
Sbjct 44173 ATAATGGAATAGGACTT-CGGTTCTATTTTGTTGGTTT-TCGGATCCGAAGTAATGGTTA 44230
Query 193 ATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG 252
| ||||| || |||||| | |||| ||| |||||||||||||||||||
Sbjct 44231 AGAGGGACAGACGGGGGCATTTGTATGGCGGTGTTAGAGGTGAAATTCTTGGATCGCCGC 44290
Query 253 AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312
|||| |||||| |||||||| || ||||||||||||||||| ||| | || |||||||
Sbjct 44291 CAGACAAACTACAGCGAAAGCATTTGCCAAGGATGTTTTCATTGATCTG-GAGCGAAAGT 44349
Query 313 TAGGGG 318
|| ||
Sbjct 44350 CAGAGG 44355
>seq158305
Length=1435
Score = 174 bits (192), Expect = 3e-41
Identities = 208/278 (75%), Gaps = 6/278 (2%)
Strand=Plus/Plus
Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97
|||| ||| ||| |||| ||| || ||| | | | ||||||||||||||||||||||||
Sbjct 419 ATGCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTACTTTGAAAAAATTAGAGTGT 478
Query 98 TCAAAGCAGGCCTTTGCTC---GAATACATTAGCATGGAATAATAGAATAGGACGTGCGG 154
|||||||||||| || | |||| ||| |||||||| ||||||||| ||||
Sbjct 479 TCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAATAGGACC-GCGG 537
Query 155 TTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCA 214
||||||||||||||||| | || | | |||||||| ||||| | |||||| |
Sbjct 538 TTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGATTAAGAGGGACGGCCGGGGGCATTC 597
Query 215 GTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCG 274
||||| | |||||||||||||||||| ||||| || | ||||||||
Sbjct 598 GTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAGAGCGAAAGCA 657
Query 275 TTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312
|| ||||| |||||||||||||||| ||||||||||
Sbjct 658 TTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 694
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 913646448000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |