Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20brandtii_20[refseq_20GCF_5F000412655.1_202013-06-28] 169,750 sequences; 2,107,242,811 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq163693 163 1e-37 seq156125 154 6e-35 seq168032 145 3e-32 seq36784 120 1e-24 seq151049 114 5e-23 seq169013 96.9 1e-17 seq152801 75.2 5e-11 >seq163693 Length=44555 Score = 163 bits (180), Expect = 1e-37 Identities = 117/135 (87%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608 ||| | |||| || ||||| |||||||||||||||||||||||| || ||| ||||| Sbjct 3223 GAGCATGAGCGTACATGTTGAGACCCGAAAGATGGTGAACTATGCTTGCGCAGGTTGAAG 3282 Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668 |||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||| Sbjct 3283 CCAGAGGAAACTCTGGTGGAGGACCGCAGCGATTCTGACGTGCAAATCGATCGTCAAACG 3342 Query 669 TGGGTATAGGGGCGA 683 || |||||||||||| Sbjct 3343 TGAGTATAGGGGCGA 3357 >seq156125 Length=28965 Score = 154 bits (170), Expect = 6e-35 Identities = 115/135 (85%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608 ||| |||||| | |||| |||||||||||||||||||||||||||| |||| |||| Sbjct 11801 GAGCAAGAGCGCACGTGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAG 11742 Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668 |||||||||||||||||||||| || |||||| ||| ||||||||||| ||||| | Sbjct 11741 CCAGAGGAAACTCTGGTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACC 11682 Query 669 TGGGTATAGGGGCGA 683 ||||||||||||||| Sbjct 11681 TGGGTATAGGGGCGA 11667 >seq168032 Length=4001303 Score = 145 bits (160), Expect = 3e-32 Identities = 104/120 (87%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623 |||| |||||||| ||||||||||||||||||| |||| ||||||||||||||||||| Sbjct 14004 TGTTAGGACCCGACAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTG 13945 Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||| || |||||| ||| ||||||||||| ||||| | ||||||||||||||| Sbjct 13944 GTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 13885 Score = 127 bits (140), Expect = 8e-27 Identities = 124/160 (78%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||||||||||||| | || ||| |||||| | | ||||| ||||||| Sbjct 25239 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 25180 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | ||| |||||||||||| ||||||| || | ||||| ||||||| |||||| | Sbjct 25179 ACCGGCACGAGACCGATAGCCAACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAG 25120 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 |||||||| || || ||||||| ||| | ||| || || Sbjct 25119 AGAGAGTTCAAGAGGGCGTGAAACCGTTAAGAGGTAAACG 25080 >seq36784 Length=242 Score = 120 bits (132), Expect = 1e-24 Identities = 93/111 (84%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623 |||| |||||| ||||||||||||||||||||| | |||| ||||||| ||||||||||| Sbjct 111 TGTTAGGACCCAAAAGATGGTGAACTATGCCTGGACAGGGCGAAGCCACAGGAAACTCTG 52 Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674 ||||||| || |||||| ||| |||||||||| | ||| | |||||| Sbjct 51 GTGGAGGTCCGTAGCGGTCCTGATGTGCAAATCGGTTGTCCGACCTGGGTA 1 >seq151049 Length=791553 Score = 114 bits (126), Expect = 5e-23 Identities = 122/161 (76%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 39 CGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAA 98 |||||| ||| ||||||||||||| | || ||| |||||| | | || || |||||| Sbjct 54003 CGAGTCAGATTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCCAAGGCTAAA 54062 Query 99 TATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 || ||| |||||||||||| ||||||| || | ||||| ||||||| |||||| | Sbjct 54063 TACCGGCACGAGACCGATAGCCAACAAGTATCGTAAGGGAAAGTTGAAAAGAACTTTGAA 54122 Query 159 AAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 |||||||| || || ||||||| ||| | ||| || || Sbjct 54123 GAGAGAGTTCAAGAGGGCGTGAAACCGTTAAGAGGTAAACG 54163 >seq169013 Length=3280149 Score = 96.9 bits (106), Expect = 1e-17 Identities = 94/120 (78%), Gaps = 1/120 (1%) Strand=Plus/Plus Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623 |||| ||||| || ||||||||||||||||||| |||| |||||||||||||| ||| Sbjct 2149517 TGTTAGGACCAGAGAGATGGTGAACTATGCCTGGGCAGGGCAAAGCCAGAGGAAACCCTG 2149576 Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||| | |||||| ||| | || ||| | | |||| | ||||| ||||| || Sbjct 2149577 GTGGAGGCCCATAGCGGTCCTGAC-TGTGAATTGGTGGTCAGACCTGGGTCCAGGGGTGA 2149635 >seq152801 Length=6144 Score = 75.2 bits (82), Expect = 5e-11 Identities = 100/139 (72%), Gaps = 10/139 (7%) Strand=Plus/Minus Query 52 TTGGGAATGCAGCTCTAAATGGGAGGTAAATTTC--------TTCTAAAGCTAAATATTG 103 ||||||||||||| | || |||| |||||||| | ||||| ||| |||| Sbjct 1444 TTGGGAATGCAGCCCAAAGTGGGTGGTAAATTCCCCGCTAAACTCTAAGGCTGAATAACT 1385 Query 104 GCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAG 163 || ||||| |||||| ||||||| | | ||||| ||||||| |||||| ||||| Sbjct 1384 GCATGAGACTGATAGCCAACAAGTATCATAAGGGAAAGTTGAAAAGAACTTTG--AAGAG 1327 Query 164 AGTTAAAAAGCACGTGAAA 182 |||| || || | ||||| Sbjct 1326 AGTTCAAGAGGGCCTGAAA 1308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2076358862500