Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20brandtii_20[refseq_20GCF_5F000412655.1_202013-06-28] 169,750 sequences; 2,107,242,811 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq158305 241 2e-61 seq163693 176 7e-42 seq152801 150 3e-34 seq168516 118 2e-24 seq152401 113 7e-23 seq167926 78.8 1e-12 seq158647 78.8 1e-12 >seq158305 Length=1435 Score = 241 bits (266), Expect = 2e-61 Identities = 207/251 (82%), Gaps = 9/251 (4%) Strand=Plus/Minus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 ||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||| | Sbjct 1194 GTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-T 1136 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC---CACCAACCA-T 130 ||| || | |||||| | |||| | |||||||||||||| | | || ||| | Sbjct 1135 CAATCT-CGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGGGGACGCCGACCGCT 1077 Query 131 AGTCGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187 | | | | | ||| |||||| | | ||||||||||||||||||||||||||||| Sbjct 1076 CGGGGGTCGCGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGAC 1017 Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 247 ||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct 1016 AAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAGCT 957 Query 248 ATCAATCTGTC 258 |||||||||| Sbjct 956 CTCAATCTGTC 946 >seq163693 Length=44555 Score = 176 bits (194), Expect = 7e-42 Identities = 109/117 (93%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 |||||||||||| || ||||||||||||||| |||||||||||||||||| |||||||| Sbjct 200 CTATTTAGCAGGCCAAAGTCTCGTTCGTTATCAGAATTAACCAGACAAATCGCTCCACCA 141 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct 140 ACTAAGAACGGCCATGCACCACCAACCACCGAATCAAGAAAGAGCTATCAATCTGTC 84 Score = 93.3 bits (102), Expect = 7e-17 Identities = 63/71 (89%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || |||||| |||||||| |||||||||| | |||||||||||||||||||| Sbjct 407 ACTCGCTGAAACCGTCATTGTAGCGCACGTGCGGCCCCGGACATCTAAGGGCATCACAGA 348 Query 62 CCTGTTATTGC 72 ||||||||||| Sbjct 347 CCTGTTATTGC 337 >seq152801 Length=6144 Score = 150 bits (166), Expect = 3e-34 Identities = 172/226 (76%), Gaps = 20/226 (9%) Strand=Plus/Plus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 ||||||||||| ||| ||| |||| | ||||||||||||||||||||||||||||||| | Sbjct 4303 GTCAGTGTAGCACGCATGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-T 4361 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC---CACCAACCATA 131 ||| || | |||||| | |||| | ||| ||||||||| | | | ||| Sbjct 4362 CAATCT-CGGGTGGCTGAACGCCACTTGTCTTTCTAAGAAGTTGGGGGACGCTGGCCAC- 4419 Query 132 GTCGATGGGG--------CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACC 183 || | |||| ||| |||||| | | | ||||||||||||||||||||||| Sbjct 4420 -TC-AGGGGGTCGCATAACTAATTAGCATGCCACAGACTCGTTCGTTATCGGAATTAACC 4477 Query 184 AGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCA 229 | |||| ||||||||||||||||| |||||||||||||||||| Sbjct 4478 A----AATCGCTCCACCAACTAAGAACAGCCATGCACCACCACCCA 4519 >seq168516 Length=4961687 Score = 118 bits (130), Expect = 2e-24 Identities = 90/104 (87%), Gaps = 2/104 (2%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 || ||||||||||||||||||| |||| | |||||||||||||||||||||||||||||| Sbjct 4420472 TCAGTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG 4420531 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 ||||| | || |||||| | |||| | |||||||||||||| Sbjct 4420532 -CTCAATC-TCGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAG 4420573 >seq152401 Length=6901723 Score = 113 bits (124), Expect = 7e-23 Identities = 87/101 (86%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 ||||||||||||||||||| |||| | |||||||||||||||||||||||||||||| || Sbjct 4966536 GTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CT 4966478 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 ||| | || |||||| | |||| | || ||||||||||| Sbjct 4966477 CAATC-TCGGGTGGCTGAACGCCACTTGTGCCTCTAAGAAG 4966438 >seq167926 Length=1666968 Score = 78.8 bits (86), Expect = 1e-12 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 |||| ||| ||||| |||||||| ||| ||||| ||||||||||||||| |||||||| Sbjct 267204 GTCTAGTTTGTTATTGGAATTAAGCAGGCAAATTGTTCCACCAACTAAGAATGGCCATGC 267145 Query 219 ACCACCAC 226 || ||||| Sbjct 267144 ACGACCAC 267137 >seq158647 Length=3724768 Score = 78.8 bits (86), Expect = 1e-12 Identities = 70/85 (82%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 31 TGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCT 90 |||||||| | ||||||||||||||||||||||| |||||| |||| | || ||||| Sbjct 3243705 TGCGGCCCCGGACATCTAAGGGCATCACAGACCTATTATTG-TTCAATC-TCGGGTGGCT 3243648 Query 91 GGAAGCCAATAGTCCCTCTAAGAAG 115 | | ||| | |||||||||||||| Sbjct 3243647 GAATGCCCCTTGTCCCTCTAAGAAG 3243623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795489699750