Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myotis_20brandtii_20[refseq_20GCF_5F000412655.1_202013-06-28]
169,750 sequences; 2,107,242,811 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq158305 241 2e-61
seq163693 176 7e-42
seq152801 150 3e-34
seq168516 118 2e-24
seq152401 113 7e-23
seq167926 78.8 1e-12
seq158647 78.8 1e-12
>seq158305
Length=1435
Score = 241 bits (266), Expect = 2e-61
Identities = 207/251 (82%), Gaps = 9/251 (4%)
Strand=Plus/Minus
Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74
||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||| |
Sbjct 1194 GTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-T 1136
Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC---CACCAACCA-T 130
||| || | |||||| | |||| | |||||||||||||| | | || ||| |
Sbjct 1135 CAATCT-CGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGGGGACGCCGACCGCT 1077
Query 131 AGTCGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187
| | | | | ||| |||||| | | |||||||||||||||||||||||||||||
Sbjct 1076 CGGGGGTCGCGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGAC 1017
Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 247
||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 1016 AAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAGCT 957
Query 248 ATCAATCTGTC 258
||||||||||
Sbjct 956 CTCAATCTGTC 946
>seq163693
Length=44555
Score = 176 bits (194), Expect = 7e-42
Identities = 109/117 (93%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
|||||||||||| || ||||||||||||||| |||||||||||||||||| ||||||||
Sbjct 200 CTATTTAGCAGGCCAAAGTCTCGTTCGTTATCAGAATTAACCAGACAAATCGCTCCACCA 141
Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|||||||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct 140 ACTAAGAACGGCCATGCACCACCAACCACCGAATCAAGAAAGAGCTATCAATCTGTC 84
Score = 93.3 bits (102), Expect = 7e-17
Identities = 63/71 (89%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| || |||||| |||||||| |||||||||| | ||||||||||||||||||||
Sbjct 407 ACTCGCTGAAACCGTCATTGTAGCGCACGTGCGGCCCCGGACATCTAAGGGCATCACAGA 348
Query 62 CCTGTTATTGC 72
|||||||||||
Sbjct 347 CCTGTTATTGC 337
>seq152801
Length=6144
Score = 150 bits (166), Expect = 3e-34
Identities = 172/226 (76%), Gaps = 20/226 (9%)
Strand=Plus/Plus
Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74
||||||||||| ||| ||| |||| | ||||||||||||||||||||||||||||||| |
Sbjct 4303 GTCAGTGTAGCACGCATGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-T 4361
Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC---CACCAACCATA 131
||| || | |||||| | |||| | ||| ||||||||| | | | |||
Sbjct 4362 CAATCT-CGGGTGGCTGAACGCCACTTGTCTTTCTAAGAAGTTGGGGGACGCTGGCCAC- 4419
Query 132 GTCGATGGGG--------CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACC 183
|| | |||| ||| |||||| | | | |||||||||||||||||||||||
Sbjct 4420 -TC-AGGGGGTCGCATAACTAATTAGCATGCCACAGACTCGTTCGTTATCGGAATTAACC 4477
Query 184 AGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCA 229
| |||| ||||||||||||||||| ||||||||||||||||||
Sbjct 4478 A----AATCGCTCCACCAACTAAGAACAGCCATGCACCACCACCCA 4519
>seq168516
Length=4961687
Score = 118 bits (130), Expect = 2e-24
Identities = 90/104 (87%), Gaps = 2/104 (2%)
Strand=Plus/Plus
Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71
|| ||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||
Sbjct 4420472 TCAGTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG 4420531
Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115
||||| | || |||||| | |||| | ||||||||||||||
Sbjct 4420532 -CTCAATC-TCGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAG 4420573
>seq152401
Length=6901723
Score = 113 bits (124), Expect = 7e-23
Identities = 87/101 (86%), Gaps = 2/101 (2%)
Strand=Plus/Minus
Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74
||||||||||||||||||| |||| | |||||||||||||||||||||||||||||| ||
Sbjct 4966536 GTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CT 4966478
Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115
||| | || |||||| | |||| | || |||||||||||
Sbjct 4966477 CAATC-TCGGGTGGCTGAACGCCACTTGTGCCTCTAAGAAG 4966438
>seq167926
Length=1666968
Score = 78.8 bits (86), Expect = 1e-12
Identities = 58/68 (85%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218
|||| ||| ||||| |||||||| ||| ||||| ||||||||||||||| ||||||||
Sbjct 267204 GTCTAGTTTGTTATTGGAATTAAGCAGGCAAATTGTTCCACCAACTAAGAATGGCCATGC 267145
Query 219 ACCACCAC 226
|| |||||
Sbjct 267144 ACGACCAC 267137
>seq158647
Length=3724768
Score = 78.8 bits (86), Expect = 1e-12
Identities = 70/85 (82%), Gaps = 2/85 (2%)
Strand=Plus/Minus
Query 31 TGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCT 90
|||||||| | ||||||||||||||||||||||| |||||| |||| | || |||||
Sbjct 3243705 TGCGGCCCCGGACATCTAAGGGCATCACAGACCTATTATTG-TTCAATC-TCGGGTGGCT 3243648
Query 91 GGAAGCCAATAGTCCCTCTAAGAAG 115
| | ||| | ||||||||||||||
Sbjct 3243647 GAATGCCCCTTGTCCCTCTAAGAAG 3243623
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795489699750
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |