Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myotis_20brandtii_20[refseq_20GCF_5F000412655.1_202013-06-28]
169,750 sequences; 2,107,242,811 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq163693 87.8 1e-15
seq152401 86.0 4e-15
seq152801 75.2 7e-12
>seq163693
Length=44555
Score = 87.8 bits (96), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 3/72 (4%)
Strand=Plus/Minus
Query 53 CTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAAT 112
|||| ||||| || ||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 589 CTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT 532
Query 113 ACAACGCAAGCT 124
|| ||||||||
Sbjct 531 -CAGCGCAAGCT 521
>seq152401
Length=6901723
Score = 86.0 bits (94), Expect = 4e-15
Identities = 67/76 (88%), Gaps = 3/76 (4%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| |||| || ||||||||| ||||| ||||| |||||||||||||||||||
Sbjct 4966734 CTCACTAAACCATC-CAATCGGTAGTA-GCGACTGGCGGTGTGTACAAAGGGCAGGGACT 4966677
Query 109 TAATACAACGCAAGCT 124
|||| |||||||||||
Sbjct 4966676 TAAT-CAACGCAAGCT 4966662
>seq152801
Length=6144
Score = 75.2 bits (82), Expect = 7e-12
Identities = 66/77 (86%), Gaps = 4/77 (5%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGT-GTACAAAGGGCAGGGAC 107
|||| ||| |||| || ||||||||| |||| |||||| || |||||||||||||||||
Sbjct 4103 CTCAGTAAACCATC-CAATCGGTAGTA-GCGATGGGCGGTGTTGTACAAAGGGCAGGGAC 4160
Query 108 GTAATACAACGCAAGCT 124
|||| |||||||||||
Sbjct 4161 TTAAT-CAACGCAAGCT 4176
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300321305000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |