Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20brandtii_20[refseq_20GCF_5F000412655.1_202013-06-28] 169,750 sequences; 2,107,242,811 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq163693 87.8 1e-15 seq152401 86.0 4e-15 seq152801 75.2 7e-12 >seq163693 Length=44555 Score = 87.8 bits (96), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 3/72 (4%) Strand=Plus/Minus Query 53 CTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAAT 112 |||| ||||| || ||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct 589 CTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT 532 Query 113 ACAACGCAAGCT 124 || |||||||| Sbjct 531 -CAGCGCAAGCT 521 >seq152401 Length=6901723 Score = 86.0 bits (94), Expect = 4e-15 Identities = 67/76 (88%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||| ||||| ||||||||||||||||||| Sbjct 4966734 CTCACTAAACCATC-CAATCGGTAGTA-GCGACTGGCGGTGTGTACAAAGGGCAGGGACT 4966677 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 4966676 TAAT-CAACGCAAGCT 4966662 >seq152801 Length=6144 Score = 75.2 bits (82), Expect = 7e-12 Identities = 66/77 (86%), Gaps = 4/77 (5%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGT-GTACAAAGGGCAGGGAC 107 |||| ||| |||| || ||||||||| |||| |||||| || ||||||||||||||||| Sbjct 4103 CTCAGTAAACCATC-CAATCGGTAGTA-GCGATGGGCGGTGTTGTACAAAGGGCAGGGAC 4160 Query 108 GTAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 4161 TTAAT-CAACGCAAGCT 4176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300321305000