Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20brandtii_20[refseq_20GCF_5F000412655.1_202013-06-28] 169,750 sequences; 2,107,242,811 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq163693 464 2e-128 seq152801 381 2e-103 seq161506 327 3e-87 seq158305 161 3e-37 seq168791 116 1e-23 >seq163693 Length=44555 Score = 464 bits (514), Expect = 2e-128 Identities = 425/530 (80%), Gaps = 29/530 (5%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACA-AGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||| |||||| || | | ||| || ||||| |||||| | ||||||||| Sbjct 43793 GTACTCATTCGAATTACGGAGCCTCTCTCGAGTCCCGTATCCGTATTTTTCGTCACTACC 43734 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||| Sbjct 43733 TCCCCGTGCCGGGATTGGGTAATTTGCGTGCCTGCTGCCTTCCTTGGAAGTGGTAGCCGT 43674 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 43673 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTATCACCATGGT 43614 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | ||||||||||||| ||||||||||||| ||||||| || || |||||| | Sbjct 43613 AGGCAGGTCACCTACCATCGAAAATTGATAGGGCAGACATTTGAAAGATCCGTCGCCGAC 43554 Query 240 TCAAGGCC--ATGCGATTCGTTAAGTTATTATGAATCACCAAGGAG---CCCCGAAG-GG 293 ||||||| |||||| || ||||||| || ||| || ||| | |||| || Sbjct 43553 ACAAGGCCGACTGCGATCAGTGAAGTTATCCAGAGTCATCACAGAGTGCAACGGAAGCGG 43494 Query 294 C--------------GTTGGTTTTTTATCTAATAAATACACCCCTTCC----GAAGTC-G 334 | ||||||| | | |||||||||| ||||| |||| ||| | Sbjct 43493 CCGAAACCACAACCGGTTGGTTCTGT-TCTAATAAATCCACCCGTTCCCTTGCGGGTCAG 43435 Query 335 GGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTAT 394 || | | ||||||||||||||||||||||| || |||||||||||||| |||||| || Sbjct 43434 GGCATAGTGGCATGTATTAGCTCTAGAATTACTACAGTTATCCATGTAGT-AGGTACGAT 43376 Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATA 454 | || ||| ||| ||||||||||||||||||||| ||||||| || | | | | || Sbjct 43375 CTAAGGAACCATAGCTGATTTAATGAGCCATTCGCGGTTTCACCGT-TTTAAGGTATGTA 43317 Query 455 CTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 43316 CTTAGACATGCATGGCTTAATCTCTGAGACAAGCATATGACTACTGGCAG 43267 >seq152801 Length=6144 Score = 381 bits (422), Expect = 2e-103 Identities = 421/561 (75%), Gaps = 61/561 (11%) Strand=Plus/Plus Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||||||||||||||| | || |||||||| ||||||| ||||| | ||||||||||| Sbjct 4641 ACTCATTCCAATTACAGGGCCTCAAAAGAGTCCTGTATTGTTATTTTTCGTCACTACCTC 4700 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4701 CCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 4760 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 ||||||||||||||||||||||||||||| ||||||||| |||||| | |||||||||| Sbjct 4761 CTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTCACCCGTGGTCACCATGGTAG 4820 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 || |||||||||||||||||||||||||| || ||||| | |||||| | | Sbjct 4821 GCACGGCGACTACCATCGAAAGTTGATAGGGCAGACGTTCGAATGGGTCGTCGCCGCCAC 4880 Query 242 -AAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAA-------GGAGCCC----- 286 || | |||||| | | ||||| || ||||||| || |||| Sbjct 4881 GGGGGGCGTGCGATCGGCCCGAGGTTATCTAGAGTCACCAAAGCCGCCGGCGCCCGCCCC 4940 Query 287 ---------CGAAGGGC------------------GTTGGTTTTTTATCTAATAAATACA 319 ||| |||| ||||| |||| |||| |||||| || Sbjct 4941 CACGGCCCGCGAGGGGCCGAGGGGAGGCTGACCGGGTTGG-TTTTGATCTGATAAATGCA 4999 Query 320 C----CCCTTCCGAAGTCGGGGT-------TTTTAGCATGTATTAGCTCTAGAATTACCA 368 | ||| ||| ||||| | ||||||||||||||||||||||||| Sbjct 5000 CGCATCCCCCCCGCGAGGGGGGTCAGCGCCCGTCGGCATGTATTAGCTCTAGAATTACCA 5059 Query 369 CGGTTATCCATGTAGTA-AG----GTACTATCAAATAAACGATAACTGATTTAATGAGCC 423 | |||||||| |||| | || | | | |||| ||| ||||||||||||||||||| Sbjct 5060 CAGTTATCCAAGTAGGAGAGGAGCGAGCGACCAAAGGAACCATAACTGATTTAATGAGCC 5119 Query 424 ATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGA 483 |||||||||||||||||| | | ||||||||||||||||||||||||||||||| Sbjct 5120 ATTCGCAGTTTCACTGTACCGGCCGTGCGTACTTAGACATGCATGGCTTAATCTTTGAGA 5179 Query 484 CAAGCATATGACTACTGGCAG 504 |||||||||| |||||||||| Sbjct 5180 CAAGCATATG-CTACTGGCAG 5199 >seq161506 Length=5318 Score = 327 bits (362), Expect = 3e-87 Identities = 412/562 (73%), Gaps = 73/562 (13%) Strand=Plus/Minus Query 5 TCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCC 63 |||||||||||||| | || |||||||| ||||||| ||||| | ||||||||||||| Sbjct 5318 TCATTCCAATTACAGGGCCTCAAAAGAGTCCTGTAT---TATTTTTCGTCACTACCTCCC 5262 Query 64 CGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCT 123 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5261 CGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCT 5202 Query 124 CAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGC 183 ||||||||||||||||||||||||||| ||||||||| |||||| | |||||||||||| Sbjct 5201 CAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTCACCCGTGGTCACCATGGTAGGC 5142 Query 184 CACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCA- 242 |||||| | ||| |||||| |||||| | ||||| | || ||| | || Sbjct 5141 ATGGCGACTACCACCAAAACTTGATAAGGCAGATGTGCGAATGGGTCGTCACCGCCACAG 5082 Query 243 AGGCCATGCGATTCG-TTAAG-TTATTATGAATCACCAAGG-----------AGCCC--- 286 || | || |||| | |||| |||| || ||||||| | ||||| Sbjct 5081 GGGGCGTGTGATTGGCCTAAGCTTATCTAGAGTCACCAAAGCCACCGGCGCTAGCCCCCC 5022 Query 287 --------CGAAGGGC------------------GTTGGTTTTTTATCTAATAAATACAC 320 ||| |||| ||||| |||| |||| ||| || ||| Sbjct 5021 ACAGCCCGCGAGGGGCAGAGGGGAGGCTGACCGGGTTGG-TTTTGATCTGATAGATGCAC 4963 Query 321 CCCTTCCGAA--GTCGGGGTTT---------TTAGCATGTATTAGCTCTAGAATTACCAC 369 | | || | || |||| | | ||||||||||||||||||||||||| Sbjct 4962 GCATCCCCCAGCGTGGGGGGGTCAGTGCCCGTCGTCATGTATTAGCTCTAGAATTACCAC 4903 Query 370 GGTTATCCATGTAGTA-AG----GTACTATCAAATAAACGATAACTGATTTAATGAGCCA 424 |||||||| |||| | || | | | |||| ||| ||||| | ||||||||| Sbjct 4902 AGTTATCCAAGTAGGAGAGGAGCGAGCGACCAAAGGAACCATAAC----TAAATGAGCCA 4847 Query 425 TTCGCAGTTTCACTGTATAG--ATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAG 482 ||| ||||||||||||| || |||| ||||||||||||||||||||||||||| || Sbjct 4846 TTCACAGTTTCACTGTACAGGCCTTGC--GTACTTAGACATGCATGGCTTAATCTTTCAG 4789 Query 483 ACAAGCATATGACTACTGGCAG 504 ||||||||||| |||||||||| Sbjct 4788 ACAAGCATATG-CTACTGGCAG 4768 >seq158305 Length=1435 Score = 161 bits (178), Expect = 3e-37 Identities = 118/136 (87%), Gaps = 7/136 (5%) Strand=Plus/Minus Query 3 ACTCATTCCAATTACAAGA----CCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTAC 58 |||||||||||||||| || | | ||||| | ||||| ||||| | |||||||| Sbjct 222 ACTCATTCCAATTACAGGAGGGCCTCGAAAGAATCATGTAT---TATTTTTCGTCACTAC 166 Query 59 CTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 118 ||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||| Sbjct 165 CTCCCCGGGTCGGGAGTGGGTAATTTGTGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 106 Query 119 TTTCTCAGGCTCCCTC 134 |||||||||||||||| Sbjct 105 TTTCTCAGGCTCCCTC 90 >seq168791 Length=14479219 Score = 116 bits (128), Expect = 1e-23 Identities = 94/110 (85%), Gaps = 3/110 (3%) Strand=Plus/Minus Query 14 TTACA-AGACCCAAAAGAGCCCTGTATCAGTATTTATT-GTCACTACCTCCCC-GTGTCG 70 ||||| || | | |||||| ||||||| ||||| || ||||||| |||||| | |||| Sbjct 6559969 TTACAGAGCCTCGAAAGAGTCCTGTATTGTTATTTTTTCGTCACTATCTCCCCCGGGTCG 6559910 Query 71 GGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| |||||||||||||||||||| |||||||||||||||||||||| || Sbjct 6559909 GGAATGGGTAATTTGCGCGCCTGCAGCCTTCCTTGGATGTGGTAGCCATT 6559860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1507836096000