Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq10074 282 6e-74 seq2190 158 2e-36 seq10133 140 5e-31 >seq10074 Length=11426 Score = 282 bits (312), Expect = 6e-74 Identities = 204/232 (88%), Gaps = 3/232 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| || ||| |||| | ||||| |||| ||||||| ||| | Sbjct 10290 GTACAAAGGGCAGGGACGTAATCGGCGCAAGCT-GCTGACTTGCGCCTACTAGGCATT-C 10233 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| || ||||||||| ||||||||||||||||||| | ||| |||||| Sbjct 10232 CTCGTTGAAGATTAATAATTGCAATAATCTATCCCCATCACGATGCATACTCACAAGATT 10173 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||| |||||| |||||||||| ||| |||||||| || |||||||||||||||||||| Sbjct 10172 ACCTAGACCTGCCGGCCAAGGTTATAAACTCGTTGGATGCATCAGTGTAGCGCGCGTGCA 10113 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG 231 ||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 10112 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTG 10061 >seq2190 Length=1673665 Score = 158 bits (174), Expect = 2e-36 Identities = 178/233 (76%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 2 TACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCC 61 |||||||||||||||| || ||||||| ||||| ||||| || |||||| |||||| || Sbjct 1115913 TACAAAGGGCAGGGACTTAATCAACGCAAGCTT-ATGACCAGCACTTACTGGGAATT-CC 1115856 Query 62 TCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TTA 120 ||||| | | || ||||||||| | ||||||||||||| ||||| | ||| Sbjct 1115855 TCGTTCATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAACGGGTTA 1115796 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 |||| |||| |||| ||| | || | ||| |||||||||||||||||| | Sbjct 1115795 CCCGCGCCTGCCGGCGTAGGGTAGGCACACACTGAGCCAGTCAGTGTAGCGCGCGTGCAG 1115736 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 ||| | ||||||||||||||||||||||||| |||| ||||| || ||||| Sbjct 1115735 CCCCGGACATCTAAGGGCATCACAGACCTGTGATTG-CTCAATCTCGGGTGGC 1115684 >seq10133 Length=8053202 Score = 140 bits (154), Expect = 5e-31 Identities = 176/235 (75%), Gaps = 5/235 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||| | ||||| ||||| | | ||| || |||||| | Sbjct 7962759 GTACAAAGGGCAGGGACTTAATCAACACAAGCTT-ATGACCCACACTTCCTGGGAATT-C 7962816 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACG-ATGAAATTTCAAAGATT 119 |||||| | | || ||||||||| ||||| |||||| ||| || | | || Sbjct 7962817 CTCGTTCATGGGGAATAATTGCAATCCCTGATCCCTATCACGCATGGGGTTCAACGGGTT 7962876 Query 120 ACCCGGACCTGTC-GGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 ||||| |||| | ||| ||| | || || ||| |||||||||||||||||| Sbjct 7962877 ACCCGCGCCTGCCCGGCGTAGGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGC 7962936 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | ||||||||||||| |||||||||||||||| ||||| || ||||| Sbjct 7962937 AGCCCGGGACATCTAAGGGCAACACAGACCTGTTATTG-CTCAATCTCGGGTGGC 7962990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751258612835