Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq15063 235 2e-59 seq11838 149 3e-33 seq13748 120 1e-24 seq19122 113 2e-22 seq13335 87.8 7e-15 >seq15063 Length=4376 Score = 235 bits (260), Expect = 2e-59 Identities = 242/312 (78%), Gaps = 11/312 (4%) Strand=Plus/Minus Query 382 GATGCTGGCGTAAT-GGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACA 440 ||||||||| || | |||| || || ||||||||| |||||||||||||||||||| || Sbjct 3012 GATGCTGGCTTATTCGGTTCCAACCGACCCGTCTTGAAACACGGACCAAGGAGTCTAGCA 2953 Query 441 TCTATGCGAGTGTTTGGGTGTCAAACCC-GTGCGCGTAATGAAAGTGA----ACGGAGGT 495 | | ||||||| | ||||| |||| || || ||||||||||||||| | ||||| Sbjct 2952 TATGTGCGAGTATGCGGGTGGCAAAACCTGTATGCGTAATGAAAGTGAGAGTAGGGAGGG 2893 Query 496 GGGAACCCGTGAGGGT----GCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAG 551 | | | || | | |||| ||||||| | |||| ||| | || |||||| Sbjct 2892 GTTCAGCTTTGCTGTTCTCTGCACTTACGACCGACCGTGATCTCTGAGAGAGG-TTTGAG 2834 Query 552 TAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCA 611 | ||||||| ||| | |||||||||||||||||||||||||||| ||| ||||| || Sbjct 2833 TTGGAGCATATCTGCTAGGACCCGAAAGATGGTGAACTATGCCTGGGTAGAATGAAGTCA 2774 Query 612 GAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGG 671 | |||||| ||| |||||| ||| |||| | ||| ||||||||||| |||||||| |||| Sbjct 2773 GGGGAAACCCTGATGGAGGTTCGTAGCGATACTGACGTGCAAATCGTTCGTCAAACTTGG 2714 Query 672 GTATAGGGGCGA 683 |||||||||||| Sbjct 2713 GTATAGGGGCGA 2702 Score = 143 bits (158), Expect = 1e-31 Identities = 131/164 (80%), Gaps = 1/164 (1%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| ||| | |||| | ||| | ||||| | |||| |||| ||||||||| | Sbjct 3453 GAGTCGCGTTCATCGGGATTTGAGCGCAAAATGTGTGGTAGGTTTCACATAAAGCTAATT 3394 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 |||||| ||||||||||||| ||||||| |||| ||||||||||||| |||||||| Sbjct 3393 ATTGGCGCGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGTTCTTTGGAA 3334 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTG 203 |||||||| ||||| | |||||||| ||||| ||||||| ||| Sbjct 3333 AGAGAGTT-AAAAGTGCCTGAAATTGCTGAAAAGGAAGCGATTG 3291 >seq11838 Length=10179742 Score = 149 bits (164), Expect = 3e-33 Identities = 105/120 (88%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623 |||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct 9142175 TGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTG 9142234 Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||| || |||||| ||| ||||||||||| ||||| | ||||||||||||||| Sbjct 9142235 GTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 9142294 >seq13748 Length=5565241 Score = 120 bits (132), Expect = 1e-24 Identities = 120/156 (77%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 44 CGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTG 103 || |||| ||||||||||||| | || ||| |||||| | | ||||| |||||||| | Sbjct 1469804 CGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAATACCG 1469745 Query 104 GCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAG 163 || |||||||||||| ||||||| || | ||||| ||||||| |||||| | |||| Sbjct 1469744 GCACGAGACCGATAGCCAACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAGAGAG 1469685 Query 164 AGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 |||| || || ||||||| ||| | ||| || || Sbjct 1469684 AGTTCAAGAGGGCGTGAAACCGTTAAGAGGTAAACG 1469649 >seq19122 Length=5646833 Score = 113 bits (124), Expect = 2e-22 Identities = 106/135 (79%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608 ||| | ||||| | || | |||||| ||||||||||| ||||||||| || | |||| Sbjct 50970 GAGCATGAGCACACGTGCTAGGACCCAAAAGATGGTGAGCTATGCCTGGGAAGAGCGAAG 50911 Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668 |||||||||||||| ||||| | || ||| | ||| ||||||||| | || || || Sbjct 50910 CCAGAGGAAACTCTTGTGGAAGTCCGTAGCCATCCTGACGTGCAAATTGGTCATCCGATC 50851 Query 669 TGGGTATAGGGGCGA 683 ||||||||||||||| Sbjct 50850 TGGGTATAGGGGCGA 50836 Score = 113 bits (124), Expect = 2e-22 Identities = 106/135 (79%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608 ||| | ||||| | || | |||||| ||||||||||| ||||||||| || | |||| Sbjct 51715 GAGCATGAGCACACGTGCTAGGACCCAAAAGATGGTGAGCTATGCCTGGGAAGAGCGAAG 51656 Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668 |||||||||||||| ||||| | || ||| | ||| ||||||||| | || || || Sbjct 51655 CCAGAGGAAACTCTTGTGGAAGTCCGTAGCCATCCTGACGTGCAAATTGGTCATCCGATC 51596 Query 669 TGGGTATAGGGGCGA 683 ||||||||||||||| Sbjct 51595 TGGGTATAGGGGCGA 51581 >seq13335 Length=1249276 Score = 87.8 bits (96), Expect = 7e-15 Identities = 92/120 (77%), Gaps = 1/120 (1%) Strand=Plus/Plus Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623 |||| ||||| || |||||||| |||||||||| |||| || ||||||||||| ||| Sbjct 488791 TGTTAGGACCGGAGAGATGGTGCACTATGCCTGGGCAGGGCAAAACCAGAGGAAACCCTG 488850 Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||| | |||||| ||| | || ||| | | |||| | ||||| ||||| || Sbjct 488851 GTGGAGGCCCATAGCGGTCCTGAC-TGTGAATTGGTGGTCAGACCTGGGTCCAGGGGTGA 488909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2077817054950