Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq2190 82.4 5e-14 seq10133 77.0 2e-12 seq10074 73.4 2e-11 >seq2190 Length=1673665 Score = 82.4 bits (90), Expect = 5e-14 Identities = 66/76 (87%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||| ||| || |||||||||||||||| Sbjct 1115954 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGACGGTGTATACAAAGGGCAGGGACT 1115897 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 1115896 TAAT-CAACGCAAGCT 1115882 >seq10133 Length=8053202 Score = 77.0 bits (84), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||| ||| | ||||||||||||||||||| Sbjct 7962719 CTCACTAAACCATC-CAATCGGTAGTA-GCGACAGGCAGTGTGTACAAAGGGCAGGGACT 7962776 Query 109 TAATACAACGCAAGCT 124 |||| |||| |||||| Sbjct 7962777 TAAT-CAACACAAGCT 7962791 >seq10074 Length=11426 Score = 73.4 bits (80), Expect = 2e-11 Identities = 55/62 (89%), Gaps = 2/62 (3%) Strand=Plus/Minus Query 63 TCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAG 122 ||| ||||||| | ||||||||||| |||||||||||||||||||||||| | |||||| Sbjct 10317 TCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CGGCGCAAG 10260 Query 123 CT 124 || Sbjct 10259 CT 10258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300513011420