Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq101732 158 4e-36 >seq101732 Length=4986 Score = 158 bits (174), Expect = 4e-36 Identities = 238/330 (72%), Gaps = 10/330 (3%) Strand=Plus/Plus Query 164 TCTGATTAGCTAGTTGGTAAGGTAACGGCT-TACCAAGGCGACGATCAGTAGCCGACCTG 222 ||| |||||||||||||||| |||| | | ||||||||||| || |||||| | | || Sbjct 3789 TCTAATTAGCTAGTTGGTAAAGTAATTGTTATACCAAGGCGAAAATTAGTAGCTGCCTTG 3848 Query 223 AGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAG 282 |||||| || | ||||||| | | ||| | || | | ||||| || ||||||||||| Sbjct 3849 AGAGGGGGAACAGCCACATAGAGATTGAAATACAGCTCTAACTC-TAATGGAGGCAGCAG 3907 Query 283 TGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGG 342 |||||||| || ||||| || ||||| ||| ||| | | ||||| || ||||| Sbjct 3908 TGGGGAATTTTCTGCAATGAGCGAAAGCTTGACAGAGCGTCATCACGTGAAGGAAGAAGG 3967 Query 343 CCT--TCGGGTCGTAAAGCTC-TGTCCTCAAGGAAGATAATGACGGTACTTGAG--GAGG 397 | | ||| ||||| || | | || || | ||||| | || || || | Sbjct 3968 CTTAAAAAGGTTGTAAACTTCTTTTGCTTAA--ATTATAATACTGATAATTAAGTTTAAA 4025 Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 457 ||| ||||||||| |||||||||||||||||||||||| || |||||||| | | Sbjct 4026 AAGTATCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGGGGATACTAGCGTTTTTCA 4085 Query 458 GAATTACTGGGGCGTAAAGGGTGCGTAGGT 487 | ||||| |||||||||| || |||||| Sbjct 4086 AATTTACT-GGGCGTAAAGTGTATGTAGGT 4114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1496075907456