Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq10074 295 1e-77 seq2190 178 2e-42 seq10133 159 7e-37 >seq10074 Length=11426 Score = 295 bits (326), Expect = 1e-77 Identities = 256/313 (82%), Gaps = 6/313 (2%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGC--CAGGCCCGCTTTGG-CGGGTCGCCGGCTTCT 76 || ||||||||||||||||||||||| |||| | || | || | ||||| Sbjct 9979 GAACGAGACCTTAACCTGCTAAATAGGATCAGGAACTTCGTGTTCTTGTATCA--CTTCT 10036 Query 77 TAGAGGGACTAT-CGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCC 135 |||||||||| | || || | | | ||||||||||||||||||||||||||||||||| Sbjct 10037 TAGAGGGACTTTGCGTGTCTAACGCAAGGAAGTTTGAGGCAATAACAGGTCTGTGATGCC 10096 Query 136 CTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTG 195 |||||||||||||||| |||||||||||||||||| | |||||||||| || |||||| Sbjct 10097 CTTAGATGTTCTGGGCTGCACGCGCGCTACACTGATGCATCCAACGAGTTTATAACCTTG 10156 Query 196 GCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATT 255 ||||| |||||| ||||||||||| | | ||||| |||||||||| ||||||||| Sbjct 10157 GCCGGCAGGTCTAGGTAATCTTGTGAGTATGCATCGTGATGGGGATAGATTATTGCAATT 10216 Query 256 ATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTC 315 ||| ||||||||||||||||||||||| |||| |||| |||| ||| ||||||||| Sbjct 10217 ATTAATCTTCAACGAGGAATGCCTAGTAGGCGCAAGTCAGCAGCTTGCGCCGATTACGTC 10276 Query 316 CCTGCCCTTTGTA 328 ||||||||||||| Sbjct 10277 CCTGCCCTTTGTA 10289 >seq2190 Length=1673665 Score = 178 bits (196), Expect = 2e-42 Identities = 174/223 (78%), Gaps = 1/223 (0%) Strand=Plus/Plus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| |||| ||||||||||||||||||||||||| | |||| ||||||||||||| Sbjct 1115692 AGATTGAG-CAATCACAGGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTAC 1115750 Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225 |||||| | || | || | | ||| ||||| ||| |||||| | | || | Sbjct 1115751 ACTGACTGGCTCAGTGTGTGCCTACCCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCC 1115810 Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285 | ||||| ||||||| | | |||||||||||| | | | |||||||||| || |||||| Sbjct 1115811 CATTCGTGATGGGGATCGGGGATTGCAATTATTCCCCATGAACGAGGAATTCCCAGTAAG 1115870 Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 || ||||| ||| |||||||||| |||||||||||||||| Sbjct 1115871 TGCTGGTCATAAGCTTGCGTTGATTAAGTCCCTGCCCTTTGTA 1115913 >seq10133 Length=8053202 Score = 159 bits (176), Expect = 7e-37 Identities = 196/260 (75%), Gaps = 6/260 (2%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | || | |||| || | ||||| |||||||||||||||| Sbjct 7963016 CTTCTTAGAGGGACAAGTGGTGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 7962959 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 ||||||||||||| | |||| ||||||||||||||||||| | || || || | | Sbjct 7962958 TTGCCCTTAGATGTCCCGGGCTGCACGCGCGCTACACTGACTGGCTCAGCGTGTGCCTAC 7962899 Query 191 CCTTGGCC-GGAAGGTCTGGGTAATCTTGTTAAACTCTGT-CGTGCTGGGGATAGAGCAT 248 ||| ||| || ||| |||||| | ||| ||| | | |||| | ||||| | || Sbjct 7962898 CCTACGCCGGGCAGGCGCGGGTAA-CCCGTTGAACCCCATGCGTGATAGGGATCAGGGAT 7962840 Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308 |||||||||| | | | |||||||||| || || ||| | | ||||| ||| | ||||| Sbjct 7962839 TGCAATTATTCCCCATGAACGAGGAATTCCCAGGAAGTGTGGGTCATAAGCTTGTGTTGA 7962780 Query 309 TTACGTCCCTGCCCTTTGTA 328 ||| |||||||||||||||| Sbjct 7962779 TTAAGTCCCTGCCCTTTGTA 7962760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946236044032