Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq10074 489 5e-136 seq9056 217 4e-54 seq660 179 1e-42 >seq10074 Length=11426 Score = 489 bits (542), Expect = 5e-136 Identities = 394/469 (84%), Gaps = 9/469 (2%) Strand=Plus/Minus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102 ||||| ||||||||||||||| | || |||||||||||||||||||||||||||||||| Sbjct 9129 TATTTCTTGTCACTACCTCCCTGAATCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 9070 Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9069 TTAGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 9010 Query 163 CCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTG 222 ||||| | ||| ||||| ||| || |||| ||||||| ||||||| |||||| ||| Sbjct 9009 CCCGTCACTGCCACGGTAGTCCAATACAGTACCGTCGAAAGCTGATAGGTCAGAAACTTG 8950 Query 223 AATGAACCATCGCCGGCTCAAGGC--CATGCGATTCGTTAAGTTATTATGAATCACCAAG 280 ||||| || |||||| | ||| | | ||||| |||| |||| ||||||||||| Sbjct 8949 AATGATCCGTCGCCGACCGAAGTCATAACGCGATCCGTTCGGTTACTATGAATCACCTGA 8890 Query 281 GAGC--CCCGAAGG-GCGTTGGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTCGG 335 | | || ||||| | ||||||| | ||||||||||| || |||| || | || | Sbjct 8889 TAACCACCAGAAGGTGGGTTGGTTCTGTATCTAATAAACACTGCCCTCCCAGGGAGAGAG 8830 Query 336 GGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATC 395 | | |||||||||||| ||||||||||||||||||||||||||||| | || ||| Sbjct 8829 GCGCGTGCGCATGTATTAGCCATAGAATTACCACGGTTATCCATGTAGTAAAG-ACCATC 8771 Query 396 AAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATAC 455 |||||||| ||||||| ||||||||||||||||||||||| | ||||| | |||||||| Sbjct 8770 AAATAAACTATAACTGTTTTAATGAGCCATTCGCAGTTTCGCCGTATA-AAAGCTTATAC 8712 Query 456 TTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 8711 TTAGACATGCATGGCTTAATCTTTAAGACAAGCATATGACTACTGGCAG 8663 >seq9056 Length=8122071 Score = 217 bits (240), Expect = 4e-54 Identities = 144/157 (92%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 348 GTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATA 407 |||||||| ||||||||||||||||||||||||||||| | || ||||||||||| ||| Sbjct 7273295 GTATTAGCCATAGAATTACCACGGTTATCCATGTAGTAAAG-ACCATCAAATAAACTATA 7273353 Query 408 ACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCAT 467 |||| ||||||||||||||||||||||| | ||||| | |||||||||||||||||||| Sbjct 7273354 ACTGTTTTAATGAGCCATTCGCAGTTTCGCCGTATAAAA-GCTTATACTTAGACATGCAT 7273412 Query 468 GGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||| |||||||||||||||||||||||| Sbjct 7273413 GGCTTAATCTTTAAGACAAGCATATGACTACTGGCAG 7273449 >seq660 Length=82565 Score = 179 bits (198), Expect = 1e-42 Identities = 140/166 (84%), Gaps = 6/166 (4%) Strand=Plus/Minus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTA-----CTATCAAA 398 |||||||||||||||||||||||||| |||||||| |||| | | | | | |||| Sbjct 64925 GCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGGAGAGGAGCGAGCGACCAAA 64866 Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTA 458 ||| ||||||||||||||||||||||||||||||||||||| | | |||||| Sbjct 64865 GGAACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTACCGGCCGTGCGTACTTA 64806 Query 459 GACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 64805 GACATGCATGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 64761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1508862881024