Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq1496 156 6e-36 seq1053 156 6e-36 seq5104 152 8e-35 seq209 149 9e-34 seq463 141 1e-31 seq878 136 6e-30 seq380 136 6e-30 seq1180 125 1e-26 >seq1496 Length=61245 Score = 156 bits (172), Expect = 6e-36 Identities = 178/234 (76%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||| ||||||| || ||||||| ||||| ||||| || |||||| |||||| | Sbjct 13224 GTACAAAGGCCAGGGACTTAATCAACGCAAGCTT-ATGACCCGAACTTACTGGGAATT-C 13281 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAG-ATT 119 |||||| | | || ||||||||| ||||||||||||| ||||| | ||| Sbjct 13282 CTCGTTCATGGGGAATAATTGCAATCCCTGATCCCCATCACGAATGGGGTTCAATGGATT 13341 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| |||| ||| ||| | || | ||| |||||||||||||||||| Sbjct 13342 ACCCGTGCCTGCGGGCGTAGGGTAGGCACATGCTGAGCCAGTCAGTGTAGCGCGCGTGCA 13401 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 13402 GCCCTGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 13454 >seq1053 Length=110669 Score = 156 bits (172), Expect = 6e-36 Identities = 178/234 (76%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||| ||||||| || ||||||| ||||| ||||| ||| |||||| |||||| | Sbjct 55636 GTACAAAGGCCAGGGACTTAATCAACGCAAGCTT-ATGACCCGCACTTACTGGGAATT-C 55693 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAG-ATT 119 |||||| | | || ||||||||| ||||||||||||| ||||| | ||| Sbjct 55694 CTCGTTCATGGGGAATAATTGCAATCCCTGATCCCCATCACGAATGGGGTTCAATGGATT 55753 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| |||| ||| ||| | || | ||| |||||||||||||| ||| Sbjct 55754 ACCCGTGCCTGCGGGCGTAGGGTAGGCACATGCTGAGCCAGTCAGTGTAGCGCGCTTGCA 55813 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 55814 GCCCTGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 55866 >seq5104 Length=10520 Score = 152 bits (168), Expect = 8e-35 Identities = 178/234 (76%), Gaps = 6/234 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||| ||||| ||||| ||| |||||| |||||| | Sbjct 1338 GTACAAAGGGCAGGGACTTAATCAACGCAAGCTT-ATGACCCGCACTTACTGGGAATT-C 1395 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | || ||||||||| | ||||||||||||| ||||| | || Sbjct 1396 CTCGTTCATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAACGGGTT 1455 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| |||| |||| ||| | || || ||| ||||||||||||| ||| Sbjct 1456 ACCCGCGCCTGCCGGCGTAGGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCG--TGCA 1513 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | |||||| |||||||||||||||||||| || ||||| || ||||| Sbjct 1514 GCCCCGGACATCTCAGGGCATCACAGACCTGTTACTG-CTCAATCTCGGGTGGC 1566 >seq209 Length=2521847 Score = 149 bits (164), Expect = 9e-34 Identities = 176/233 (76%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 2 TACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCC 61 |||||||||||||||| || ||||||| ||||| ||||| | | |||||| ||||| || Sbjct 2393708 TACAAAGGGCAGGGACTTAATCAACGCAAGCTT-ATGACCCACACTTACTGAGAATT-CC 2393765 Query 62 TCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TTA 120 || || | | || ||||||||| | ||||||||||||| ||||| | ||| Sbjct 2393766 TCTTTCATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAATGGGTTA 2393825 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 |||| |||| ||| ||| | || || ||| ||||||||||||| |||| | Sbjct 2393826 CCCGCGCCTGCTGGCGTAGGCTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGGGTGCTG 2393885 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 ||| | |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 2393886 CCCTGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCTGGTGGC 2393937 >seq463 Length=878704 Score = 141 bits (156), Expect = 1e-31 Identities = 173/230 (75%), Gaps = 12/230 (5%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || |||| || || || ||||| ||| |||||| |||||| | Sbjct 304826 GTACAAAGGGCAGGGACTTAATCAATGCAAGTTT-ATGACCCGCTCTTACTGGGAATT-C 304883 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT----TTCAAAG 116 || ||| | | || |||||||| | ||||||||||| |||| ||||| | Sbjct 304884 CTTGTTCATGGGGAATAATTGCAAGTCCCGATCCCCATCAC----AAATGGGGTTCAACG 304939 Query 117 A-TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCG 175 ||||||| ||||| | || ||| | || || ||| |||||||||| ||| Sbjct 304940 GGTTACCCGCACCTGCCAGCGTAGGGTAGGCACACGCTGAGCCAGTCAGTGTAGCACGCT 304999 Query 176 TGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 ||| |||| | |||||||||||||||||||||||||||||| ||||| || Sbjct 305000 TGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 305048 >seq878 Length=194879 Score = 136 bits (150), Expect = 6e-30 Identities = 158/208 (76%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 27 GCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGACCAACAATTGCAATG 86 || ||||| ||||| ||| |||||| |||||| ||||||| | | || ||||||||| Sbjct 76535 GCAAGCTT-ATGACCCGCACTTACTGGGAATT-CCTCGTTCATGGGGAATAATTGCAATC 76592 Query 87 ATCTATCCCCATCACGATGAAATTTCAAAGA-TTACCCGGACCTGTCGGCCAAGGTGATA 145 | ||||||||||||| ||||| | ||||||| |||| |||| ||| | Sbjct 76593 CCCGATCCCCATCACGAATGGGGTTCAACGGGTTACCCGCGCCTGCCGGCGTAGGGTAGG 76652 Query 146 GACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 205 || || ||| |||||||||||||||||| |||| | ||||||||||||||||||| Sbjct 76653 CACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAG 76712 Query 206 ACCTGTTATTGCCTCAAACTTCCGTGGC 233 ||||||||||| ||||| || ||||| Sbjct 76713 ACCTGTTATTG-CTCAATCTCGGGTGGC 76739 >seq380 Length=1041218 Score = 136 bits (150), Expect = 6e-30 Identities = 166/221 (75%), Gaps = 8/221 (4%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||| ||||| ||||| || |||||| |||| ||| Sbjct 962811 GTACAAAGGGCAGGGACTTAATCAACGCAAGCTT-ATGACCTGCACTTACTGGGAA-TTC 962868 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATT 119 |||||| | | || ||||||||| | ||||||||||| ||| ||||| || || Sbjct 962869 CTCGTTCATGGGGAATAATTGCAATCCCCAATCCCCATCACAATG--GGTTCAACAGGTT 962926 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGA---ATACATCAGTGTAGCGCGCGT 176 ||||| |||| || ||| | || | ||| | ||||||||| || | | Sbjct 962927 ACCCGCACCTATCTTGGTAGGGTAGGCACAGGCTGAGCCACCAGTCAGTGTAGTGCACAT 962986 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 || |||| | |||||||| |||||||||||||||||||||| Sbjct 962987 GCAGCCCCGGACATCTAAAGGCATCACAGACCTGTTATTGC 963027 >seq1180 Length=103892 Score = 125 bits (138), Expect = 1e-26 Identities = 175/238 (74%), Gaps = 13/238 (5%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || |||||| ||||| ||| | | | |||| | |||||| | Sbjct 4921 GTACAAAGGGCAGGGACTTAATCAACGAAAGCTT-ATGTCCCACACTTATTGGGAATT-C 4978 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT----TTCAA-A 115 ||| || | | || ||||||||| | ||||||||||| |||| ||||| | Sbjct 4979 CTCATTCATGGGGAATAATTGCAATCCCCGATCCCCATCAC----AAATGGGGTTCAACA 5034 Query 116 GATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCG 175 | |||||| |||| | || ||| | || || ||| |||||||||||| | Sbjct 5035 GGTTACCCCCGCCTGCCAGCGTAGGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGC-CA 5093 Query 176 TGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 ||| |||| | ||||||||||||||||||||||| |||||| ||||| || ||||| Sbjct 5094 TGCAGCCCTGGACATCTAAGGGCATCACAGACCTCTTATTG-CTCAATCTCGGGTGGC 5150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751915100610