Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14]
11,654 sequences; 2,034,575,300 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq878 104 1e-20
seq128 104 1e-20
seq1496 86.0 3e-15
seq1053 86.0 3e-15
>seq878
Length=194879
Score = 104 bits (114), Expect = 1e-20
Identities = 93/117 (79%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|||||||||||||||| |||| || ||| |||| ||| |||| ||||| ||||
Sbjct 77043 GAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCCGGCGGGTCATGGGAATAACGCCGCCG 77102
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||| | ||||||||| ||||| ||| |||||||||||||||||||||||||||
Sbjct 77103 CATCGCCAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 77159
>seq128
Length=3675711
Score = 104 bits (114), Expect = 1e-20
Identities = 93/117 (79%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|||||||||||||||| |||| || ||| |||| ||| |||| ||||| ||||
Sbjct 1918826 GAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCCGGCGGGTCATGGGAATAACGCCGCCG 1918885
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||| | ||||||||| ||||| ||| |||||||||||||||||||||||||||
Sbjct 1918886 CATCGCAAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 1918942
>seq1496
Length=61245
Score = 86.0 bits (94), Expect = 3e-15
Identities = 94/125 (75%), Gaps = 10/125 (8%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAA-------- 52
|||||||||||||||| |||| || ||| |||| ||| |||| ||||
Sbjct 13758 GAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCCGGCGGGTCATGGGAATAAGGCCTCCG 13817
Query 53 CATCGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTC 112
||||||| || | ||||||||| ||||| ||| | |||||||||||||||||||||
Sbjct 13818 CATCGCC--ATGGCCAGTCGGCATCGTTTATGGTCGGGGCTACGACGGTATCTGATCGTC 13875
Query 113 TTCGA 117
|||||
Sbjct 13876 TTCGA 13880
>seq1053
Length=110669
Score = 86.0 bits (94), Expect = 3e-15
Identities = 94/125 (75%), Gaps = 10/125 (8%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAA-------- 52
|||||||||||||||| |||| || ||| |||| ||| |||| ||||
Sbjct 56170 GAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCCGGCGGGTCATGGGAATAAGGCCTCCA 56229
Query 53 CATCGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTC 112
||||||| || | ||||||||| ||||| ||| | |||||||||||||||||||||
Sbjct 56230 CATCGCC--ATGGCCAGTCGGCATCGTTTATGGTCGGGGCTACGACGGTATCTGATCGTC 56287
Query 113 TTCGA 117
|||||
Sbjct 56288 TTCGA 56292
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278369583060
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |