Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14]
11,654 sequences; 2,034,575,300 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq1496 174 3e-41
seq878 174 3e-41
seq12 174 3e-41
seq1053 172 1e-40
seq128 165 1e-38
seq1180 113 8e-23
>seq1496
Length=61245
Score = 174 bits (192), Expect = 3e-41
Identities = 208/278 (75%), Gaps = 6/278 (2%)
Strand=Plus/Minus
Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97
|||| ||| ||| |||| ||| || ||| | | | ||||||||||||||||||||||||
Sbjct 14163 ATGCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTACTTTGAAAAAATTAGAGTGT 14104
Query 98 TCAAAGCAGGCCTTTGCTC---GAATACATTAGCATGGAATAATAGAATAGGACGTGCGG 154
|||||||||||| || | |||| ||| |||||||| ||||||||| ||||
Sbjct 14103 TCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAATAGGACC-GCGG 14045
Query 155 TTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCA 214
||||||||||||||||| | || | | |||||||| ||||| | ||||| |
Sbjct 14044 TTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGATTAAGAGGGACGGCTGGGGGCATTC 13985
Query 215 GTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCG 274
||||| | |||||||||||||||||| | ||||| || | ||||||||
Sbjct 13984 GTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCTCAAGACGGACCAGAGCGAAAGCA 13925
Query 275 TTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312
|| ||||| |||||||||||||||| ||||||||||
Sbjct 13924 TTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 13888
>seq878
Length=194879
Score = 174 bits (192), Expect = 3e-41
Identities = 208/278 (75%), Gaps = 6/278 (2%)
Strand=Plus/Minus
Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97
|||| ||| ||| |||| ||| || ||| | | | ||||||||||||||||||||||||
Sbjct 77442 ATGCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTACTTTGAAAAAATTAGAGTGT 77383
Query 98 TCAAAGCAGGCCTTTGCTC---GAATACATTAGCATGGAATAATAGAATAGGACGTGCGG 154
|||||||||||| || | |||| ||| |||||||| ||||||||| ||||
Sbjct 77382 TCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAATAGGACC-GCGG 77324
Query 155 TTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCA 214
||||||||||||||||| | || | | |||||||| ||||| | |||||| |
Sbjct 77323 TTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGATTAAGAGGGACGGCCGGGGGCATTC 77264
Query 215 GTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCG 274
||||| | |||||||||||||||||| ||||| || | ||||||||
Sbjct 77263 GTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAGAGCGAAAGCA 77204
Query 275 TTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312
|| ||||| |||||||||||||||| ||||||||||
Sbjct 77203 TTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 77167
>seq12
Length=16239124
Score = 174 bits (192), Expect = 3e-41
Identities = 208/278 (75%), Gaps = 6/278 (2%)
Strand=Plus/Minus
Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97
|||| ||| ||| |||| ||| || ||| | | | ||||||||||||||||||||||||
Sbjct 13240574 ATGCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTACTTTGAAAAAATTAGAGTGT 13240515
Query 98 TCAAAGCAGGCCTTTGCTC---GAATACATTAGCATGGAATAATAGAATAGGACGTGCGG 154
|||||||||||| || | |||| ||| |||||||| ||||||||| ||||
Sbjct 13240514 TCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAATAGGACC-GCGG 13240456
Query 155 TTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCA 214
||||||||||||||||| | || | | |||||||| ||||| | |||||| |
Sbjct 13240455 TTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGATTAAGAGGGACGGCCGGGGGCATTC 13240396
Query 215 GTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCG 274
||||| | |||||||||||||||||| ||||| || | ||||||||
Sbjct 13240395 GTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAGAGCGAAAGCA 13240336
Query 275 TTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312
|| ||||| |||||||||||||||| ||||||||||
Sbjct 13240335 TTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 13240299
>seq1053
Length=110669
Score = 172 bits (190), Expect = 1e-40
Identities = 208/278 (75%), Gaps = 9/278 (3%)
Strand=Plus/Minus
Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97
|||| ||| ||| |||| ||| || ||| | | | ||||||||||||||||||||||||
Sbjct 56572 ATGCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTACTTTGAAAAAATTAGAGTGT 56513
Query 98 TCAAAGCAGGCCTTTGCTC---GAATACATTAGCATGGAATAATAGAATAGGACGTGCGG 154
|||||||||||| || | |||| ||| |||||||| ||||||||| | ||
Sbjct 56512 TCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAATAGGACCGG-GG 56454
Query 155 TTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCA 214
||||||||||||||||| | || ||| |||||||| ||||| | ||||| |
Sbjct 56453 TTCTATTTTGTTGGTTTTCGGAACTGCC---ATGATTAAGAGGGACGGCTGGGGGCATTC 56397
Query 215 GTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCG 274
||||| | |||||||||||||||||| | ||||| || | ||||||||
Sbjct 56396 GTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCTCAAGACGGACCAGAGCGAAAGCA 56337
Query 275 TTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312
|| ||||| |||||||||||||||| ||||||||||
Sbjct 56336 TTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 56300
>seq128
Length=3675711
Score = 165 bits (182), Expect = 1e-38
Identities = 207/278 (74%), Gaps = 7/278 (3%)
Strand=Plus/Minus
Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97
|||| ||| ||| |||| ||| || ||| | | | ||||||||||||||||||||||||
Sbjct 1919224 ATGCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTACTTTGAAAAAATTAGAGTGT 1919165
Query 98 TCAAAGCAGGCC---TTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGG 154
|||||||||||| || | |||| ||| |||||||| ||||||||| | ||
Sbjct 1919164 TCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAATAGGAC-CGAGG 1919106
Query 155 TTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCA 214
||||||||||||||||| | || | | |||||||| ||||| | |||||| |
Sbjct 1919105 TTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGATTAAGAGGGACGGCCGGGGGCAT-T 1919047
Query 215 GTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCG 274
||||| | |||||||||||||||||| ||||| || | ||||||||
Sbjct 1919046 GTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAGAGCGAAAGCA 1918987
Query 275 TTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312
|| ||||| |||||||||||||||| ||||||||||
Sbjct 1918986 TTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 1918950
>seq1180
Length=103892
Score = 113 bits (124), Expect = 8e-23
Identities = 195/277 (70%), Gaps = 11/277 (4%)
Strand=Plus/Minus
Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACT-TTTACTTTGAAAAAATTAGAGTGT 97
|||| ||| ||| |||| || | ||| | | | |||||||||||||| ||||||
Sbjct 5836 ATGCTCTTAGCTGAGTGTCCCTCAGGGCCCGAAGTGTTTACTTTGAAAAA----GAGTGT 5781
Query 98 TCAAAGCAGGCCTTTGCTC---GAATACATTAGCATGGAATAATAGAATAGGACGTGCGG 154
|||| ||||||| ||| | ||||| | | |||||||| ||||| ||| | |||
Sbjct 5780 TCAATGCAGGCCCGAGCTGCCTGGATACACAACTA-GGAATAATGGAATAAGACCT-CGG 5723
Query 155 TTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCA 214
||||||||||||||||| | || | | |||||||| ||||| | |||| |
Sbjct 5722 TTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGATTAAGAGGGACTCCCAGGGGCATTC 5663
Query 215 GTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCG 274
|||| || ||||||||||||||||| | ||||| || | || || ||
Sbjct 5662 ATATTGCGCCGTTGGAGGTGAAATTCTTGGACCGGTGTAAGACAGACCAGAGCAAAGGCA 5603
Query 275 TTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311
|| ||||| |||||||||||||||| ||| |||||
Sbjct 5602 TTTGCCAAGAATGTTTTCATTAATCA-AGAATGAAAG 5567
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915093342592
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |