Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq5104 91.5 9e-17 seq474 82.4 5e-14 seq1496 77.0 2e-12 seq1180 77.0 2e-12 seq1053 77.0 2e-12 seq380 75.2 7e-12 >seq5104 Length=10520 Score = 91.5 bits (100), Expect = 9e-17 Identities = 68/76 (89%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 1298 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 1355 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 1356 TAAT-CAACGCAAGCT 1370 >seq474 Length=750284 Score = 82.4 bits (90), Expect = 5e-14 Identities = 66/76 (87%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| || | || ||||||||| ||||||||||| ||||||||||||| ||||| Sbjct 408409 CTCACTAAACCGTC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCGGGGACT 408352 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 408351 TAAT-CAACGCAAGCT 408337 >seq1496 Length=61245 Score = 77.0 bits (84), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 || ||||| |||| ||| ||||||| ||||||||||| ||||||||||| ||||||| Sbjct 13184 CTAACTAAACCATCCAATT-GGTAGTA-GCGACGGGCGGTGTGTACAAAGGCCAGGGACT 13241 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 13242 TAAT-CAACGCAAGCT 13256 >seq1180 Length=103892 Score = 77.0 bits (84), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||| || || ||||||||||||||||||| Sbjct 4881 CTCACTAAACCATC-CAATCGGTAGTA-GCGACAGGTGGAGTGTACAAAGGGCAGGGACT 4938 Query 109 TAATACAACGCAAGCT 124 |||| ||||| ||||| Sbjct 4939 TAAT-CAACGAAAGCT 4953 >seq1053 Length=110669 Score = 77.0 bits (84), Expect = 2e-12 Identities = 62/71 (87%), Gaps = 3/71 (4%) Strand=Plus/Plus Query 54 TAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATA 113 ||| |||| || ||||||||| ||||||||||| ||||||||||| ||||||| |||| Sbjct 55601 TAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGCCAGGGACTTAAT- 55657 Query 114 CAACGCAAGCT 124 ||||||||||| Sbjct 55658 CAACGCAAGCT 55668 >seq380 Length=1041218 Score = 75.2 bits (82), Expect = 7e-12 Identities = 66/77 (86%), Gaps = 4/77 (5%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGT-GTACAAAGGGCAGGGAC 107 |||| ||| |||| || ||||||||| |||| |||||| || ||||||||||||||||| Sbjct 962770 CTCAGTAAACCATC-CAATCGGTAGTA-GCGATGGGCGGTGTTGTACAAAGGGCAGGGAC 962827 Query 108 GTAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 962828 TTAAT-CAACGCAAGCT 962843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300767135720