Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14]
11,654 sequences; 2,034,575,300 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq5104 91.5 9e-17
seq474 82.4 5e-14
seq1496 77.0 2e-12
seq1180 77.0 2e-12
seq1053 77.0 2e-12
seq380 75.2 7e-12
>seq5104
Length=10520
Score = 91.5 bits (100), Expect = 9e-17
Identities = 68/76 (89%), Gaps = 3/76 (4%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| |||| || ||||||||| ||||||||||| |||||||||||||||||||
Sbjct 1298 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 1355
Query 109 TAATACAACGCAAGCT 124
|||| |||||||||||
Sbjct 1356 TAAT-CAACGCAAGCT 1370
>seq474
Length=750284
Score = 82.4 bits (90), Expect = 5e-14
Identities = 66/76 (87%), Gaps = 3/76 (4%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| || | || ||||||||| ||||||||||| ||||||||||||| |||||
Sbjct 408409 CTCACTAAACCGTC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCGGGGACT 408352
Query 109 TAATACAACGCAAGCT 124
|||| |||||||||||
Sbjct 408351 TAAT-CAACGCAAGCT 408337
>seq1496
Length=61245
Score = 77.0 bits (84), Expect = 2e-12
Identities = 65/76 (86%), Gaps = 3/76 (4%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|| ||||| |||| ||| ||||||| ||||||||||| ||||||||||| |||||||
Sbjct 13184 CTAACTAAACCATCCAATT-GGTAGTA-GCGACGGGCGGTGTGTACAAAGGCCAGGGACT 13241
Query 109 TAATACAACGCAAGCT 124
|||| |||||||||||
Sbjct 13242 TAAT-CAACGCAAGCT 13256
>seq1180
Length=103892
Score = 77.0 bits (84), Expect = 2e-12
Identities = 65/76 (86%), Gaps = 3/76 (4%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| |||| || ||||||||| ||||| || || |||||||||||||||||||
Sbjct 4881 CTCACTAAACCATC-CAATCGGTAGTA-GCGACAGGTGGAGTGTACAAAGGGCAGGGACT 4938
Query 109 TAATACAACGCAAGCT 124
|||| ||||| |||||
Sbjct 4939 TAAT-CAACGAAAGCT 4953
>seq1053
Length=110669
Score = 77.0 bits (84), Expect = 2e-12
Identities = 62/71 (87%), Gaps = 3/71 (4%)
Strand=Plus/Plus
Query 54 TAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATA 113
||| |||| || ||||||||| ||||||||||| ||||||||||| ||||||| ||||
Sbjct 55601 TAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGCCAGGGACTTAAT- 55657
Query 114 CAACGCAAGCT 124
|||||||||||
Sbjct 55658 CAACGCAAGCT 55668
>seq380
Length=1041218
Score = 75.2 bits (82), Expect = 7e-12
Identities = 66/77 (86%), Gaps = 4/77 (5%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGT-GTACAAAGGGCAGGGAC 107
|||| ||| |||| || ||||||||| |||| |||||| || |||||||||||||||||
Sbjct 962770 CTCAGTAAACCATC-CAATCGGTAGTA-GCGATGGGCGGTGTTGTACAAAGGGCAGGGAC 962827
Query 108 GTAATACAACGCAAGCT 124
|||| |||||||||||
Sbjct 962828 TTAAT-CAACGCAAGCT 962843
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300767135720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |