Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14]
11,654 sequences; 2,034,575,300 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq878 96.9 4e-18
seq12 96.9 4e-18
seq1496 93.3 4e-17
seq1053 91.5 2e-16
seq128 89.7 5e-16
>seq878
Length=194879
Score = 96.9 bits (106), Expect = 4e-18
Identities = 129/176 (73%), Gaps = 5/176 (3%)
Strand=Plus/Minus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC---TTTGCTCGAATACATTACCAT 69
||||||||||||||||||||| |||||||||||||| || | |||| | |
Sbjct 77406 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 77347
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|||||||| ||||||||| ||||||||||||||| ||||| | ||| | | ||||
Sbjct 77346 GGAATAATGGAATAGGAC-CGCGGTTCTATTTTGTTGGTTT-TCGGAACTGAGGCCATGA 77289
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185
| || | ||| | |||||| | ||||| | | ||||||||||||||||
Sbjct 77288 TTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGA 77233
>seq12
Length=16239124
Score = 96.9 bits (106), Expect = 4e-18
Identities = 129/176 (73%), Gaps = 5/176 (3%)
Strand=Plus/Minus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC---TTTGCTCGAATACATTACCAT 69
||||||||||||||||||||| |||||||||||||| || | |||| | |
Sbjct 13240538 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 13240479
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|||||||| ||||||||| ||||||||||||||| ||||| | ||| | | ||||
Sbjct 13240478 GGAATAATGGAATAGGAC-CGCGGTTCTATTTTGTTGGTTT-TCGGAACTGAGGCCATGA 13240421
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185
| || | ||| | |||||| | ||||| | | ||||||||||||||||
Sbjct 13240420 TTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGA 13240365
>seq1496
Length=61245
Score = 93.3 bits (102), Expect = 4e-17
Identities = 128/176 (73%), Gaps = 5/176 (3%)
Strand=Plus/Minus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC---TTTGCTCGAATACATTACCAT 69
||||||||||||||||||||| |||||||||||||| || | |||| | |
Sbjct 14127 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 14068
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|||||||| ||||||||| ||||||||||||||| ||||| | ||| | | ||||
Sbjct 14067 GGAATAATGGAATAGGAC-CGCGGTTCTATTTTGTTGGTTT-TCGGAACTGAGGCCATGA 14010
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185
| || | ||| | ||||| | ||||| | | ||||||||||||||||
Sbjct 14009 TTAAGAGGGACGGCTGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGA 13954
>seq1053
Length=110669
Score = 91.5 bits (100), Expect = 2e-16
Identities = 127/176 (72%), Gaps = 8/176 (5%)
Strand=Plus/Minus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC---TTTGCTCGAATACATTACCAT 69
||||||||||||||||||||| |||||||||||||| || | |||| | |
Sbjct 56536 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 56477
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|||||||| ||||||||| | ||||||||||||| ||||| | || ||| ||||
Sbjct 56476 GGAATAATGGAATAGGAC-CGGGGTTCTATTTTGTTGGTTTTCGGAACTGCC----ATGA 56422
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185
| || | ||| | ||||| | ||||| | | ||||||||||||||||
Sbjct 56421 TTAAGAGGGACGGCTGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGA 56366
>seq128
Length=3675711
Score = 89.7 bits (98), Expect = 5e-16
Identities = 128/176 (73%), Gaps = 6/176 (3%)
Strand=Plus/Minus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC---TTTGCTCGAATACATTACCAT 69
||||||||||||||||||||| |||||||||||||| || | |||| | |
Sbjct 1919188 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 1919129
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|||||||| ||||||||| | ||||||||||||| ||||| | ||| | | ||||
Sbjct 1919128 GGAATAATGGAATAGGAC-CGAGGTTCTATTTTGTTGGTTT-TCGGAACTGAGGCCATGA 1919071
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185
| || | ||| | |||||| | ||||| | | ||||||||||||||||
Sbjct 1919070 TTAAGAGGGACGGCCGGGGGCAT-TGTATTGCGCCGCTAGAGGTGAAATTCTTGGA 1919016
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511942196160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |