Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1496 179 7e-43 seq1053 179 7e-43 seq5104 178 2e-42 seq209 176 9e-42 seq463 170 4e-40 seq878 159 7e-37 seq380 152 1e-34 seq1180 149 1e-33 seq92 75.2 2e-11 >seq1496 Length=61245 Score = 179 bits (198), Expect = 7e-43 Identities = 197/258 (76%), Gaps = 3/258 (1%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 13480 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 13423 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||| ||||||||||||||||||| | || | || | | Sbjct 13422 ATGCCCTTAGATGTCCAGGGCTGCACGCGCGCTACACTGACTGGCTCAGCATGTGCCTAC 13363 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| ||| | ||| |||||||| | || | | ||||| ||||||| | |||| Sbjct 13362 CCTACGCCCGCAGGCACGGGTAATCCATTGAACCCCATTCGTGATGGGGATCAGGGATTG 13303 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| | | | |||||||||| || |||||| || ||||| ||| ||||||||| Sbjct 13302 CAATTATTCCCCATGAACGAGGAATTCCCAGTAAGTTCGGGTCATAAGCTTGCGTTGATT 13243 Query 311 ACGTCCCTGCCCTTTGTA 328 | ||||||| |||||||| Sbjct 13242 AAGTCCCTGGCCTTTGTA 13225 >seq1053 Length=110669 Score = 179 bits (198), Expect = 7e-43 Identities = 197/258 (76%), Gaps = 3/258 (1%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 55892 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 55835 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||| ||| ||||||||||||||| | || | || | | Sbjct 55834 ATGCCCTTAGATGTCCAGGGCTGCAAGCGCGCTACACTGACTGGCTCAGCATGTGCCTAC 55775 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| ||| | ||| |||||||| | || | | ||||| ||||||| | |||| Sbjct 55774 CCTACGCCCGCAGGCACGGGTAATCCATTGAACCCCATTCGTGATGGGGATCAGGGATTG 55715 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| | | | |||||||||| || |||||| ||| ||||| ||| ||||||||| Sbjct 55714 CAATTATTCCCCATGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTTGCGTTGATT 55655 Query 311 ACGTCCCTGCCCTTTGTA 328 | ||||||| |||||||| Sbjct 55654 AAGTCCCTGGCCTTTGTA 55637 >seq5104 Length=10520 Score = 178 bits (196), Expect = 2e-42 Identities = 197/258 (76%), Gaps = 5/258 (2%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| || ||||||||||||| Sbjct 1592 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAGTAACAGGTCTGTG 1535 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 ||||||| |||||| | |||| |||||||| ||||||||| | || || || | | Sbjct 1534 ATGCCCTGAGATGTCCGGGGCTGCACGCGC--TACACTGACTGGCTCAGCGTGTGCCTAC 1477 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| ||||| ||| |||||| | | || | | ||||| ||||||| | | |||| Sbjct 1476 CCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCCATTCGTGATGGGGATCGGGGATTG 1417 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| | | | |||||||||| || |||||| ||| ||||| ||| ||||||||| Sbjct 1416 CAATTATTCCCCATGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTTGCGTTGATT 1357 Query 311 ACGTCCCTGCCCTTTGTA 328 | |||||||||||||||| Sbjct 1356 AAGTCCCTGCCCTTTGTA 1339 >seq209 Length=2521847 Score = 176 bits (194), Expect = 9e-42 Identities = 196/258 (76%), Gaps = 3/258 (1%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 2393963 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCAGA-GATTGAG-CAATAACAGGTCTGTG 2393906 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||| |||| |||||||||||||| | || || || | | Sbjct 2393905 ATGCCCTTAGATGTCCAGGGCAGCACCCGCGCTACACTGACTGGCTCAGCGTGTGCCTAG 2393846 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| ||| | ||| |||||| | | || | | ||||| ||||||| | | |||| Sbjct 2393845 CCTACGCCAGCAGGCGCGGGTAACCCATTGAACCCCATTCGTGATGGGGATCGGGGATTG 2393786 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| | | | || ||||||| | |||||| | | ||||| ||| ||||||||| Sbjct 2393785 CAATTATTCCCCATGAAAGAGGAATTCTCAGTAAGTGTGGGTCATAAGCTTGCGTTGATT 2393726 Query 311 ACGTCCCTGCCCTTTGTA 328 | |||||||||||||||| Sbjct 2393725 AAGTCCCTGCCCTTTGTA 2393708 >seq463 Length=878704 Score = 170 bits (188), Expect = 4e-40 Identities = 195/258 (76%), Gaps = 3/258 (1%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | ||||| || | ||||| |||||||||||||||| Sbjct 305082 CTTCTTAGAGGGACAAGTGGCGTTCAGCCGCCCGA-GATTGAG-CAATAACAGGTCTGTG 305025 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||| ||| ||| ||||||||||| | || || || | | Sbjct 305024 ATGCCCTTAGATGTCCGGGGCTGCAAGCGTGCTACACTGACTGGCTCAGCGTGTGCCTAC 304965 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| || || |||| |||||| | | || | | | ||| ||||||| | | ||| Sbjct 304964 CCTACGCTGGCAGGTGCGGGTAACCCGTTGAACCCCATTTGTGATGGGGATCGGGACTTG 304905 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| | | | ||| |||||| || |||||| ||| ||||| | | || |||||| Sbjct 304904 CAATTATTCCCCATGAACAAGGAATTCCCAGTAAGAGCGGGTCATAAACTTGCATTGATT 304845 Query 311 ACGTCCCTGCCCTTTGTA 328 | |||||||||||||||| Sbjct 304844 AAGTCCCTGCCCTTTGTA 304827 >seq878 Length=194879 Score = 159 bits (176), Expect = 7e-37 Identities = 175/229 (76%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 76765 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 76708 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||| ||||||||||||||||||| | || || || | | Sbjct 76707 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTCAGCGTGTGCCTAC 76648 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| ||||| ||| |||||| | | || | | ||||| ||||||| | | |||| Sbjct 76647 CCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCCATTCGTGATGGGGATCGGGGATTG 76588 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGC 299 |||||||| | | | |||||||||| || |||||| ||| ||||| ||| Sbjct 76587 CAATTATTCCCCATGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGC 76539 >seq380 Length=1041218 Score = 152 bits (168), Expect = 1e-34 Identities = 198/262 (76%), Gaps = 10/262 (4%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| | || || || |||||||||||||||| Sbjct 963068 CTTCTTAGAGGGACAAGTGGCGTTCAGCC-ACCCCAGATTAAG-CAATAACAGGTCTGTG 963011 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGA--GC-CAACGAGTTCA 187 ||||| |||||||| | |||| ||| | || |||||||||| | || || | || | Sbjct 963010 ATGCCTTTAGATGTCCGGGGCTGCATGTGCACTACACTGACTGGTGGCTCAGCCTGTGCC 962951 Query 188 TCACCTTGGCCGGA-AGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGC 246 | ||| | | || |||| |||||| || ||| ||| | | ||| ||||||| | | Sbjct 962950 T-ACCCTACCAAGATAGGTGCGGGTAACCT-GTTGAACCCATT-GTGATGGGGATTGGGG 962894 Query 247 ATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTT 306 |||||||||||| | | | |||||||||| || |||||| || ||||| ||| ||||| Sbjct 962893 ATTGCAATTATTCCCCATGAACGAGGAATTCCCAGTAAGTGCAGGTCATAAGCTTGCGTT 962834 Query 307 GATTACGTCCCTGCCCTTTGTA 328 ||||| |||||||||||||||| Sbjct 962833 GATTAAGTCCCTGCCCTTTGTA 962812 >seq1180 Length=103892 Score = 149 bits (164), Expect = 1e-33 Identities = 189/255 (74%), Gaps = 4/255 (2%) Strand=Plus/Minus Query 75 CTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATG 133 ||||||||||| | ||| | |||| || | ||||| |||||| |||||||||||| Sbjct 5173 CTTAGAGGGACAAGTGGCATTCAGCCACCCGA-GATTGAG-CAATAAGAGGTCTGTGATG 5116 Query 134 CCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCT 193 ||||||||||| | |||| ||| | ||||||||||||| | || || || | | ||| Sbjct 5115 CCCTTAGATGTCCAGGGCTGCATG-GCGCTACACTGACTGGCTCAGCGTGTGCCTACCCT 5057 Query 194 TGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAA 253 || || ||| |||||| || | || | | | ||| ||||||| | | ||||||| Sbjct 5056 ACGCTGGCAGGCGGGGGTAACCTGTTGAACCCCATTTGTGATGGGGATCGGGGATTGCAA 4997 Query 254 TTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACG 313 ||||| | | | || ||||||| || | |||| | | | ||| ||| ||||||||| | Sbjct 4996 TTATTCCCCATGAATGAGGAATTCCCAATAAGTGTGGGACATAAGCTTTCGTTGATTAAG 4937 Query 314 TCCCTGCCCTTTGTA 328 ||||||||||||||| Sbjct 4936 TCCCTGCCCTTTGTA 4922 >seq92 Length=4639795 Score = 75.2 bits (82), Expect = 2e-11 Identities = 70/85 (82%), Gaps = 3/85 (4%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 4565404 CTTCTTAGAGGGACAAGGGGCGTTCAGCCACCTGA-GATTGAG-CAATAACAGGTCTGTG 4565347 Query 131 ATGCCCTTAGATGTTCTGGGCCGCA 155 |||||||||||||| | |||||||| Sbjct 4565346 ATGCCCTTAGATGTCCGGGGCCGCA 4565322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947089613312