Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14]
11,654 sequences; 2,034,575,300 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq2326 104 4e-20
seq780 104 4e-20
seq568 98.7 2e-18
seq282 86.0 1e-14
seq671 78.8 2e-12
seq11485 77.0 5e-12
seq2108 75.2 2e-11
seq21 73.4 6e-11
seq3 73.4 6e-11
>seq2326
Length=26768
Score = 104 bits (114), Expect = 4e-20
Identities = 93/114 (82%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | ||||| | || | || |||| || || |
Sbjct 26156 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCCAAT 26099
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 26098 GGGGCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 26045
>seq780
Length=233323
Score = 104 bits (114), Expect = 4e-20
Identities = 97/121 (80%), Gaps = 2/121 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| ||||| | || | || |||| || || |
Sbjct 96601 GTACGAGAGGAACCGCAGG-TTCAGACGT-TTGGTGTATGTGCTTGGCTGAGGAGCCAAT 96658
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||||||||| |||||||| |||||||||||||||||||||||| | |||
Sbjct 96659 GGGGCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCCCTCCCA 96718
Query 121 G 121
|
Sbjct 96719 G 96719
>seq568
Length=488602
Score = 98.7 bits (108), Expect = 2e-18
Identities = 93/115 (81%), Gaps = 3/115 (3%)
Strand=Plus/Minus
Query 5 GAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCG 64
|||||||||||| | |||||| | ||||| | || | || |||| || || || |
Sbjct 123433 GAGAGGAACCGCAGG-TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCCAATGGGG 123376
Query 65 CGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCC 119
||||||||||||||| |||||||| |||||||||||||||||||||||| ||||
Sbjct 123375 CGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC-TGCC 123322
>seq282
Length=1596459
Score = 86.0 bits (94), Expect = 1e-14
Identities = 83/104 (80%), Gaps = 2/104 (2%)
Strand=Plus/Minus
Query 11 AACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGC 70
|||||| | |||||| | ||||| | || | || |||| || || || |||||||
Sbjct 1140471 AACCGCAGG-TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCCAATGGGGCGAAGC 1140414
Query 71 TACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 1140413 TACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 1140370
>seq671
Length=444311
Score = 78.8 bits (86), Expect = 2e-12
Identities = 48/51 (94%), Gaps = 0/51 (0%)
Strand=Plus/Plus
Query 64 GCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
|||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 82660 GCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 82710
>seq11485
Length=5055
Score = 77.0 bits (84), Expect = 5e-12
Identities = 59/70 (84%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 45 TGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAA 104
|| |||| || || || |||||||||||||||| |||||||| |||||| |||||||
Sbjct 4491 TGGCTGAGGAGCCAATGGGGCGAAGCTACCATCTGTGGGATTATGACTGAACACCTCTAA 4550
Query 105 GTCAGAATCC 114
||||||||||
Sbjct 4551 GTCAGAATCC 4560
>seq2108
Length=28951
Score = 75.2 bits (82), Expect = 2e-11
Identities = 47/51 (92%), Gaps = 0/51 (0%)
Strand=Plus/Plus
Query 64 GCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
|| ||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 22553 GCAAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 22603
>seq21
Length=11920260
Score = 73.4 bits (80), Expect = 6e-11
Identities = 87/114 (76%), Gaps = 3/114 (3%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||| |||||||| || | |||||| | ||||| | || | || ||| || || |
Sbjct 2130256 GTATGAGAGGAAGGGCAGG-TTCAGAC-ATTTGGTGTATGTGCATGGCTGGGGAGCCAAT 2130313
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| || ||||||||||||| ||||||||| || ||||||||||||| |||||||
Sbjct 2130314 GGGGCAAAGCTACCATCTG-TGGATTATGACTAAACGCCTCTAAGTTAGAATCC 2130366
>seq3
Length=32863254
Score = 73.4 bits (80), Expect = 6e-11
Identities = 58/70 (83%), Gaps = 0/70 (0%)
Strand=Plus/Minus
Query 45 TGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAA 104
|| |||| || || || || ||||||||||||| |||||||| ||||| ||||||||
Sbjct 20546397 TGGCTGAGGAGCCAATGGGGCAAAGCTACCATCTGTGGGATTATGACTGAATGCCTCTAA 20546338
Query 105 GTCAGAATCC 114
||||||||||
Sbjct 20546337 GTCAGAATCC 20546328
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819107513856
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |