Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq2326 104 4e-20 seq780 104 4e-20 seq568 98.7 2e-18 seq282 86.0 1e-14 seq671 78.8 2e-12 seq11485 77.0 5e-12 seq2108 75.2 2e-11 seq21 73.4 6e-11 seq3 73.4 6e-11 >seq2326 Length=26768 Score = 104 bits (114), Expect = 4e-20 Identities = 93/114 (82%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| | ||||| | || | || |||| || || | Sbjct 26156 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCCAAT 26099 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 26098 GGGGCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 26045 >seq780 Length=233323 Score = 104 bits (114), Expect = 4e-20 Identities = 97/121 (80%), Gaps = 2/121 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| ||||| | || | || |||| || || | Sbjct 96601 GTACGAGAGGAACCGCAGG-TTCAGACGT-TTGGTGTATGTGCTTGGCTGAGGAGCCAAT 96658 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||||||| |||||||| |||||||||||||||||||||||| | ||| Sbjct 96659 GGGGCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCCCTCCCA 96718 Query 121 G 121 | Sbjct 96719 G 96719 >seq568 Length=488602 Score = 98.7 bits (108), Expect = 2e-18 Identities = 93/115 (81%), Gaps = 3/115 (3%) Strand=Plus/Minus Query 5 GAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCG 64 |||||||||||| | |||||| | ||||| | || | || |||| || || || | Sbjct 123433 GAGAGGAACCGCAGG-TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCCAATGGGG 123376 Query 65 CGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCC 119 ||||||||||||||| |||||||| |||||||||||||||||||||||| |||| Sbjct 123375 CGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC-TGCC 123322 >seq282 Length=1596459 Score = 86.0 bits (94), Expect = 1e-14 Identities = 83/104 (80%), Gaps = 2/104 (2%) Strand=Plus/Minus Query 11 AACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGC 70 |||||| | |||||| | ||||| | || | || |||| || || || ||||||| Sbjct 1140471 AACCGCAGG-TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCCAATGGGGCGAAGC 1140414 Query 71 TACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 ||||||||| |||||||| |||||||||||||||||||||||| Sbjct 1140413 TACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 1140370 >seq671 Length=444311 Score = 78.8 bits (86), Expect = 2e-12 Identities = 48/51 (94%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 64 GCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 |||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 82660 GCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 82710 >seq11485 Length=5055 Score = 77.0 bits (84), Expect = 5e-12 Identities = 59/70 (84%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 45 TGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAA 104 || |||| || || || |||||||||||||||| |||||||| |||||| ||||||| Sbjct 4491 TGGCTGAGGAGCCAATGGGGCGAAGCTACCATCTGTGGGATTATGACTGAACACCTCTAA 4550 Query 105 GTCAGAATCC 114 |||||||||| Sbjct 4551 GTCAGAATCC 4560 >seq2108 Length=28951 Score = 75.2 bits (82), Expect = 2e-11 Identities = 47/51 (92%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 64 GCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 || ||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 22553 GCAAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 22603 >seq21 Length=11920260 Score = 73.4 bits (80), Expect = 6e-11 Identities = 87/114 (76%), Gaps = 3/114 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||| |||||||| || | |||||| | ||||| | || | || ||| || || | Sbjct 2130256 GTATGAGAGGAAGGGCAGG-TTCAGAC-ATTTGGTGTATGTGCATGGCTGGGGAGCCAAT 2130313 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | || ||||||||||||| ||||||||| || ||||||||||||| ||||||| Sbjct 2130314 GGGGCAAAGCTACCATCTG-TGGATTATGACTAAACGCCTCTAAGTTAGAATCC 2130366 >seq3 Length=32863254 Score = 73.4 bits (80), Expect = 6e-11 Identities = 58/70 (83%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 45 TGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAA 104 || |||| || || || || ||||||||||||| |||||||| ||||| |||||||| Sbjct 20546397 TGGCTGAGGAGCCAATGGGGCAAAGCTACCATCTGTGGGATTATGACTGAATGCCTCTAA 20546338 Query 105 GTCAGAATCC 114 |||||||||| Sbjct 20546337 GTCAGAATCC 20546328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819107513856