Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq410 105 5e-18 seq115 98.7 8e-16 seq10 91.5 1e-13 >seq410 Length=980372 Score = 105 bits (116), Expect = 5e-18 Identities = 78/91 (86%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 61286 CGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGT 61345 ||||||| || ||||||||||||||||| || ||||||||||| ||||||||||||||| Sbjct 301994 CGGAGGCCCGCTGTTTCTACGGCTTCCAAATCGCCATGGAGAACATCCACTCGGAGATGT 302053 Query 61346 ACAGTGTTCTCATCGATACGTACATCAGGGA 61376 |||| | ||||| || || ||||||| ||| Sbjct 302054 ACAGCCTCCTCATTGACACCTACATCAAGGA 302084 >seq115 Length=3908719 Score = 98.7 bits (108), Expect = 8e-16 Identities = 87/109 (80%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329 ||||||||||| || | || || || |||||||| ||||| || ||| ||| |||||| Sbjct 3774277 CAGGAGGTGCAGGTTCCAGAAGCTCGCTGTTTCTATGGCTTTCAAATTCTCATCGAGAAT 3774336 Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378 || ||||| |||||||||||| | || || || || |||||||| |||| Sbjct 3774337 GTTCACTCAGAGATGTACAGTTTGCTAATAGACACTTACATCAGAGAGC 3774385 >seq10 Length=16450340 Score = 91.5 bits (100), Expect = 1e-13 Identities = 208/305 (68%), Gaps = 10/305 (3%) Strand=Plus/Plus Query 61069 CCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACG 61128 ||||| || || | || | |||| ||| | || || || || |||||||||||||| Sbjct 11918980 CCCATGGAATACCATGACCTCTGGCAGATGGATAAGAAAGCCGA-GCTTCCTTCTGGACA 11919038 Query 61129 GTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGG-AGCGTTT-ATCGAGCGGTG 61186 | |||||||| | | ||| | ||| | | |||||| ||| | | | | || | Sbjct 11919039 GCTGAGGAGGTGGCCCTCTCCCAGGACCGGCAGCACTGGGCAGCCCTGGAGCCCGAGGAG 11919098 Query 61187 AACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATG 61246 | || |||||| ||| ||||| ||||| | || | || ||| ||||| Sbjct 11919099 AGGCAC--TTCATTTCGCAT---TTGGCCTTCTTAGTTGCCAGCCATGGCATCACCAATG 11919153 Query 61247 AGAATTTATTGGAACG-TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTAC 61305 |||| || |||| || ||| || || || || || | | || || || ||||||||| Sbjct 11919154 AGAACTTGGTGGAGCGGTTTAGC-CAAGAAGTTCAGATCACCGAAGCCCGCTGTTTCTAC 11919212 Query 61306 GGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACG 61365 ||||||| ||||||||||| || |||| || || ||||||||| | ||||| || || Sbjct 11919213 AGCTTCCAAATTGCCATGGAAAACATCCATTCTGAAATGTACAGTCTCCTCATTGACACT 11919272 Query 61366 TACAT 61370 |||| Sbjct 11919273 GACAT 11919277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397511532174560