Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq7835 120 1e-24 seq7759 105 3e-20 seq7765 100 1e-18 >seq7835 Length=18122103 Score = 120 bits (132), Expect = 1e-24 Identities = 92/109 (84%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 575 GAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCG 634 |||||||||||||||||||||| |||| |||||||||||||||||||||||||| || Sbjct 15851006 GAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGAGGTCCG 15850947 Query 635 CAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || | | ||| ||||||||||| ||||| | ||||||||||| ||| Sbjct 15850946 TAGTGTTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGACGA 15850898 >seq7759 Length=36627259 Score = 105 bits (116), Expect = 3e-20 Identities = 94/118 (80%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625 || ||||| |||||| || ||| | |||||| || ||| |||||||||||||||||||| Sbjct 27783907 TTAGGACCTGAAAGAGGGCGAATTGTGCCTGGGTAAGGTAAAGCCAGAGGAAACTCTGGT 27783848 Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||| || ||| |||||| |||||||||| | ||| | || ||||||||| || Sbjct 27783847 GGAGGTCCGTAGCAGTTCTGACGTGCAAATCTGTTGTCTGACCTGAGTATAGGGGTGA 27783790 >seq7765 Length=11866429 Score = 100 bits (110), Expect = 1e-18 Identities = 119/160 (74%), Gaps = 1/160 (1%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 ||||| |||| ||||||||||||| | || ||| |||||| | | ||||| ||||||| Sbjct 1512030 GAGTCAGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 1511971 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | ||| ||||| ||||| ||||||| | | | ||| ||||||| |||||| | Sbjct 1511970 ACCGGCACGAGACGGATAGTCAACAAGTACCAT-AAGGGAAGTTGAAAAGAACTTTGAAG 1511912 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 |||||||| || || ||||||| ||| | ||| || || Sbjct 1511911 AGAGAGTTCAAGAGGGCGTGAAACCGTTAAGAGGTAAACG 1511872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079831145600