Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq7759 149 1e-33
seq10 104 4e-20
seq3 91.5 2e-16
>seq7759
Length=36627259
Score = 149 bits (164), Expect = 1e-33
Identities = 185/250 (74%), Gaps = 14/250 (6%)
Strand=Plus/Minus
Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76
|| ||||| || |||| | || |||||||||||| |||| ||||||||| ||| | |
Sbjct 27781089 CAATGTAGAGCATGTGCAGTCCCCGACATCTAAGGGCGTCACTGACCTGTTACTGC-TAA 27781031
Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCGA 136
| ||| | | ||| ||| | ||||||| |||||| | | | || || | | |
Sbjct 27781030 ATCTTGGGTAG-CTGAGCACCACTTGTCCCTCGAAGAAGTCGGAAAACA--CAGACTTG- 27780975
Query 137 TGGGG--------CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACA 188
|||| ||| |||||||| | ||||| ||| ||| |||||||||||||||
Sbjct 27780974 -GGGGTTGCGTAACTAGTTAGCAGGCCAGAGTCTCATTCCTTACTGGAATTAACCAGACA 27780916
Query 189 AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTA 248
||| |||||||| ||||||||||||||| |||||||||| |||||||||||| |||||
Sbjct 27780915 GATCTCTCCACCAGCTAAGAACGGCCATGTGCCACCACCCACAGAATCAAGAAAAAGCTA 27780856
Query 249 TCAATCTGTC 258
||| ||| ||
Sbjct 27780855 TCACTCTATC 27780846
>seq10
Length=10432422
Score = 104 bits (114), Expect = 4e-20
Identities = 81/94 (86%), Gaps = 2/94 (2%)
Strand=Plus/Minus
Query 22 TAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTT 81
|||||||||||| |||| | |||||||||||||||||||||||||||||| ||||| | |
Sbjct 5800236 TAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATC-T 5800179
Query 82 CCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115
| |||||| | |||| | ||||||||||||||
Sbjct 5800178 CGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAG 5800145
>seq3
Length=3957629
Score = 91.5 bits (100), Expect = 2e-16
Identities = 77/95 (81%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218
|||| |||| |||| |||||||||||| ||||| ||| ||| | ||||||| |||||||
Sbjct 3109631 GTCTTGTTCATTATAGGAATTAACCAGGCAAATTACTTCACTGAATAAGAACAGCCATGC 3109690
Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253
||||||| || |||||| |||||| || || ||
Sbjct 3109691 ACCACCATGCACAGAATCGGGAAAGAACTTTCCAT 3109725
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796739236032
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |