Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq7762 316 3e-84
seq7781 311 1e-82
seq7818 223 6e-56
seq7856 190 3e-46
seq7759 113 8e-23
>seq7762
Length=3345841
Score = 316 bits (350), Expect = 3e-84
Identities = 248/294 (84%), Gaps = 2/294 (1%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59
|||| ||| | |||||||| | | || |||||||||||||||||||||||||||||
Sbjct 14438 TACTGAGCAGGATTACCATGGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 14379
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119
| ||||||||| |||||||||| ||||||||||||||||||||||||||| |||| |
Sbjct 14378 ACCACGGTCTAAGCCCAGCTCAC-TTCCCTATTAGTGGGTGAACAATCCAATGCTTGGTG 14320
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179
||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 14319 AATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 14260
Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct 14259 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCT 14200
Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
| ||| | || | ||||||| ||||| |||||| ||| |||||||
Sbjct 14199 TAAAACCCAAAAGGTCAGAAGGATCTTGAGGCCCTGCTTTCACGGTCTGTATTC 14146
>seq7781
Length=3670399
Score = 311 bits (344), Expect = 1e-82
Identities = 228/264 (86%), Gaps = 1/264 (0%)
Strand=Plus/Plus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
|||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 473432 TCATCAGTAGGGTAAAACTAACCTGTCTCAGGACGGTCTAAAGCCAGCTCACGTTCCCTA 473491
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150
|||||||||||||||||||| |||| || ||||||||| ||||| |||||||| ||
Sbjct 473492 TTAGTGGGTGAACAATCCAA-GCTTGGTGAGTTCTGCTTCACAATGATGGGAAGAGCTGA 473550
Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210
||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct 473551 CATCGAAGGATCACAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCC 473610
Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270
||||||||||||| ||| |||||| || | ||| | || | |||||||| |||
Sbjct 473611 CTGTGGTAACTTTCCTGACACCTCCTGCTTAAAACCCGAAAGGTCAGAAGGATCGTGAGG 473670
Query 271 CCACACTTTCATGGTTTGTATTCA 294
|| | |||||| ||| ||||||||
Sbjct 473671 CCCCGCTTTCACGGTCTGTATTCA 473694
>seq7818
Length=84771923
Score = 223 bits (246), Expect = 6e-56
Identities = 191/235 (81%), Gaps = 1/235 (0%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59
|||||||| | |||||||| | | || | ||||||| |||||||||||||| || |
Sbjct 56016179 TACTAAGCAGGATTACCATGGCAACAACACATTATCAGTAAGGTAAAACTAACCTATCCC 56016120
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119
|| | ||||||| |||||||||| || |||| ||||| |||||||||||| || | |
Sbjct 56016119 ATTATGGTCTAATCCCAGCTCACCTTTCCTACTAGTGAATGAACAATCCAATGCCTGGTG 56016060
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179
||||||||||| ||||||||||||| | ||||| |||||||| |||||||| | | ||
Sbjct 56016059 AATTCTGCTTCATAATGATAGGAAGAGACAACATCAAAGGATCATAAAGCAACATTGTTA 56016000
Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTC 234
|||||||||||| ||| ||||||||||||| |||||||||| ||||| ||| ||
Sbjct 56015999 TGAACGCTTGGCCACCATAAGCCAGTTATCCTTGTGGTAACTCTTCTGACACTTC 56015945
>seq7856
Length=16994587
Score = 190 bits (210), Expect = 3e-46
Identities = 208/273 (76%), Gaps = 14/273 (5%)
Strand=Plus/Plus
Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTC----- 86
||||||||| ||||||||||| |||| ||||| |||||||||||||||| ||
Sbjct 16642815 CATCAGTAGTGTAAAACTAACATGTC-CATGATAGTCTAAACCCAGCTCATGTAAGTGAA 16642873
Query 87 ----CCTATTAGTGG-GTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGG 141
|| ||||||| ||||||||||||| | || |||||||||||| |||||||
Sbjct 16642874 CGATCCAATTAGTGAAGTGAACAATCCAATGTTTGGTGAATTCTGCTTCACAGTGATAGG 16642933
Query 142 AAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGC 201
|||||| ||| | ||| ||||||||||| | | ||| |||| ||||| ||||||||||
Sbjct 16642934 AAGAGCTGACTTTGAAAGATCAAAAAGCGA--TTGCTGTGAATACTTGGTTGCCACAAGC 16642991
Query 202 CAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGG 261
||||||||||| |||||||||||| |||||| | || ||| | | || | |||
Sbjct 16642992 CAGTTATCCCTTTGGTAACTTTTCCAACACCTCCTG-CTGAAAACCCAAAGGTCAGAAGT 16643050
Query 262 ATCGATAGGCCACACTTTCATGGTTTGTATTCA 294
||| |||| |||||||||||| ||||| ||
Sbjct 16643051 ATCATGCGGCCCCACTTTCATGGTCTGTATCCA 16643083
>seq7759
Length=36627259
Score = 113 bits (124), Expect = 8e-23
Identities = 84/97 (87%), Gaps = 1/97 (1%)
Strand=Plus/Plus
Query 137 ATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCA 196
||||||||| |||||| ||||||||||||||||| | |||| | | |||||| ||||
Sbjct 27783433 ATAGGAAGAATCGACATA-AAGGATCAAAAAGCAACCTTGCTAAGCATGCTTGGACGCCA 27783491
Query 197 CAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCT 233
|||||||||||||||||||||||||||||| |||||
Sbjct 27783492 TAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCT 27783528
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854332741632
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |