Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq7865 370 3e-100 seq7855 260 5e-67 seq7816 248 3e-63 seq7850 228 3e-57 seq5441 217 5e-54 seq7758 210 7e-52 seq7857 205 3e-50 seq7786 163 9e-38 seq7781 107 6e-21 seq7762 84.2 7e-14 >seq7865 Length=68117122 Score = 370 bits (410), Expect = 3e-100 Identities = 234/253 (92%), Gaps = 0/253 (0%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||| ||||||||||||| ||| ||||| | | |||||||||||||||| | Sbjct 38332650 CTCCCACTTACTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCTA 38332709 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||| ||||||||| |||||||| ||||||||||||||||||| || | Sbjct 38332710 CAGGGTCTTCTTTCCCTGCTGATTCCACCAAGCCCATTCCCTTGGCTGTGGTTTCTCTGG 38332769 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 38332770 ATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATG 38332829 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 38332830 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCA 38332889 Query 477 TTGAATTTCTTCA 489 ||||||||||||| Sbjct 38332890 TTGAATTTCTTCA 38332902 Score = 354 bits (392), Expect = 3e-95 Identities = 258/297 (87%), Gaps = 3/297 (1%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||| ||||||| ||| ||||| | | |||||||||||||||||| Sbjct 8948264 CTCCCACTTATTCTACGCCTCTCATGTCTCTTCACTGTGCCAGACTAGAGTCAAGCTCAA 8948205 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||| ||||||| ||||| ||| ||||||||||||||||||| || Sbjct 8948204 CAGGGTCTTCTTTCCCA-CTGATTCTGCCAAACCCATTCCCTTGGCTGTGGTTTCACTGA 8948146 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| |||||| ||||||||||| ||| |||||||||| | | |||||||||||| | Sbjct 8948145 ATAGTAGGTAGGGATAGTGGGAATCTTGTTCATCCATTCATACACATCACTAATTAGACG 8948086 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 | ||||||||||||| |||||||||||| |||||||||| |||||||||| ||||| Sbjct 8948085 ATGAGGCATTTGGCTCTCTTAAGAGAGTC--AGTTACTCCCACCGTTTACCCACGCTTCA 8948028 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||| ||| |||||| |||||||||||| || |||||| Sbjct 8948027 TTGAATTTCTTCACTTTGACATTTAGAACACTGGACAGAAATCACATCGCATCAACA 8947971 >seq7855 Length=25611994 Score = 260 bits (288), Expect = 5e-67 Identities = 236/300 (79%), Gaps = 29/300 (10%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||| ||| |||||||||| |||| ||||| | | | ||||||||| |||||||| Sbjct 16955158 CTCCCACTCATTTTACACCTCTCCTGTCACTTCACCATGCCAGACTAGAGTGAAGCTCAA 16955217 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 ||||||| ||||||| || ||||||||||||||||||| ||| | Sbjct 16955218 CAGGGTCGTCTTTCC------AT------------GTTCCCTTGGCTGTGGTTTTGCTGG 16955259 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTA---G 413 ||||||| |||||||||||||||||| ||| | || || |||||||||| | Sbjct 16955260 ATAGTAGGTAGGGACAGTGGGAATCTTGTT--------CCTGTGCATCACTAATTATTAG 16955311 Query 414 ATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCT 473 || ||||||||||||||||||||||||||| ||||||||||| ||||||| ||| Sbjct 16955312 GTGGTGAGGCATTTGGCTACCTTAAGAGAGTCCTAGTTACTCCCATGATTTACCCAGGCT 16955371 Query 474 TGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 | ||||||||||||||||||||||| |||||||||| |||||||||||| ||||||| Sbjct 16955372 TCATTGAATTTCTTCACTTTGACATTTAGAGCACTGGCCAGAAATCACATCATGTCAACA 16955431 >seq7816 Length=41823926 Score = 248 bits (274), Expect = 3e-63 Identities = 180/206 (87%), Gaps = 7/206 (3%) Strand=Plus/Minus Query 336 CCTTGG-CTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATT 394 |||||| |||||||||| ||||||||||| |||||||||||||||||||||| ||||||| Sbjct 18748073 CCTTGGTCTGTGGTTTCTCTAGATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATT 18748014 Query 395 CATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACT 454 ||| || | ||||||||||||| ||||| ||||||||||||||||||||||||| || Sbjct 18748013 CATATGCATTACTAATTAGATGA---GGCATGTGGCTACCTTAAGAGAGTCATAGTTGCT 18747957 Query 455 CCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAG 514 || ||| ||||| |||||| ||||| |||||||| |||||||| |||||||||||||| Sbjct 18747956 CCTGCCATTTACTTGCGCTTCATTGAACTTCTTCACCTTGACATTGAGAGCACTGGGCAG 18747897 Query 515 AAATCACATTGCGTC---AACATCAC 537 |||||||||||||| |||||||| Sbjct 18747896 GAATCACATTGCGTCAAGAACATCAC 18747871 >seq7850 Length=56397658 Score = 228 bits (252), Expect = 3e-57 Identities = 237/304 (78%), Gaps = 9/304 (3%) Strand=Plus/Plus Query 224 TGCGCCGAAACGGCT-CCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTC-GGAC 281 ||| || | | |||| |||||||| |||||||||| | ||| | ||| | ||| || Sbjct 1672640 TGCCCCTACAGGGCTTCCCACTTAATCTACACCTCCTATGTCTCTGCACCATGTCAGGTT 1672699 Query 282 TAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGG 341 || ||| ||||||| ||||||||| || | |||| | ||||| ||||||||| Sbjct 1672700 TACAGTT----TCAACAGAGTCTTCTTTGACCACAGATTTTTCTAAGCCA-TTCCCTTGG 1672754 Query 342 CTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAA-TCTCGTTAATCCATTCATGCG 400 |||||||||| ||||| ||| || |||||||| || | || || |||||||||||| Sbjct 1672755 CTGTGGTTTCATCAGATAATAGCTAAAGACAGTGGAAAATATCATTCATCCATTCATGCA 1672814 Query 401 CGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCC-GC 459 ||| ||||||||||| | |||||||||||||||||||||||||||||||| ||| | Sbjct 1672815 TGTCCCTAATTAGATGGTGGAGCATTTGGCTACCTTAAGAGAGTCATAGTTACACCCATC 1672874 Query 460 CGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATC 519 |||| | | |||| |||||||||||||||||||||||||| |||| |||| ||||| Sbjct 1672875 AATTTATCTGGGCTTCAGTGAATTTCTTCACTTTGACATTCAGAACACTAGGCAAAAATC 1672934 Query 520 ACAT 523 |||| Sbjct 1672935 ACAT 1672938 >seq5441 Length=3463 Score = 217 bits (240), Expect = 5e-54 Identities = 140/153 (92%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||||||||||| ||| ||||| | | |||||||||||||||||| Sbjct 37 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAA 96 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | Sbjct 97 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCGCTTGGCTGTGGTTTCGCTGG 156 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAAT 389 ||||||| |||||||||||||| ||||||| || Sbjct 157 ATAGTAGGTAGGGACAGTGGGACTCTCGTTCAT 189 >seq7758 Length=15084873 Score = 210 bits (232), Expect = 7e-52 Identities = 167/198 (84%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 337 CTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCA 396 ||||||||||| || || || ||||| |||||||||||||||||| || |||||||| Sbjct 1313672 CTTGGCTGTGGCTTTACTGGACAGTAGGTAGGGACAGTGGGAATCTAATTTATCCATTCG 1313613 Query 397 TGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCC 456 ||| | ||| |||||||||||| ||||||||||||||||||| | ||||||||||||||| Sbjct 1313612 TGCACATCATTAATTAGATGACAAGGCATTTGGCTACCTTAAAAAAGTCATAGTTACTCC 1313553 Query 457 CGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAA 516 |||| ||||| | || | ||||||||||||| ||||||||||||| |||| ||||| Sbjct 1313552 CGCCATTTACTCATGC-TCATTGAATTTCTTCATTTTGACATTCAGAATGCTGGACAGAA 1313494 Query 517 ATCAC-ATTGCGTCAACA 533 ||||| || | ||||||| Sbjct 1313493 ATCACAATGGTGTCAACA 1313476 >seq7857 Length=43258702 Score = 205 bits (226), Expect = 3e-50 Identities = 195/257 (76%), Gaps = 33/257 (13%) Strand=Plus/Plus Query 239 CCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA 298 |||||||||||||||||||||| ||| |||| | | ||||||||||||||||||| Sbjct 9540498 CCCACTTATTCTACACCTCTCATGTCTCCTCACTGTGCCAAACTAGAGTCAAGCTCAACA 9540557 Query 299 GGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 358 ||||| ||||||| || ||||| | ||||| ||||| ||||||||||||||| Sbjct 9540558 GGGTCCGCTTTCCCTCCT-ATTCCTCTAAGCCTGTTCCTTTGGCTGTGGTTTCG------ 9540610 Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 || ||||||||||||| || |||||||||||| Sbjct 9540611 --------------------------TTCATCCATTCATGCGGGTTGCTAATTAGATGAT 9540644 Query 419 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTT 478 |||||||||||||||||||||||||||||||||||| ||||| |||||| || ||| || Sbjct 9540645 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTGCCGCCATTTACCTGCACTTCATT 9540704 Query 479 GAATTTCTTCACTTTGA 495 ||||||||||||||||| Sbjct 9540705 GAATTTCTTCACTTTGA 9540721 >seq7786 Length=83011774 Score = 163 bits (180), Expect = 9e-38 Identities = 126/150 (84%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||||||||||| ||| ||| | | | | | |||||||||| ||||| Sbjct 14765564 CTCCCACTTATTCTACACCTCTCATGTCTCTTCCCCATGCCAGGCTAGAGTCAAACTCAA 14765505 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||| |||| ||||| | ||||||| ||| | || | ||||||||||||||||||||| | Sbjct 14765504 CAGGATCTTTTTTCCTCACTGATTCTGCCTAACCTGGTCCCTTGGCTGTGGTTTCGCTGG 14765445 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTT 386 ||||||| |||||| ||||||| ||| ||| Sbjct 14765444 ATAGTAGGTAGGGATAGTGGGACTCTTGTT 14765415 >seq7781 Length=3670399 Score = 107 bits (118), Expect = 6e-21 Identities = 88/107 (82%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||| ||| Sbjct 473727 CTTCTGCTCCACTGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCCTTACC 473786 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 |||| |||| ||| |||||||| ||||||||||||||| || |||| Sbjct 473787 GTTTGACAGGTGTAGCGCCCCAGTCAAACTCCCCACCTGGCACTGTC 473833 >seq7762 Length=3345841 Score = 84.2 bits (92), Expect = 7e-14 Identities = 83/107 (78%), Gaps = 4/107 (4%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| | |||| ||||||| |||| |||| | ||||||||||||| |||| Sbjct 14112 CTTCTGCTCCATGGGAGGTTTCTGTCCTCCCTGAGCTCGTCTTAGGACACCTGTGTTACC 14053 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 |||| |||| ||| ||||| ||||| |||||||||| || |||| Sbjct 14052 GTTTGACAGGTGTACCGCC----CCAAATTCCCCACCTGGCACTGTC 14010 Score = 82.4 bits (90), Expect = 2e-13 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||||||||||| ||| ||| | | | |||||||||||||||||| Sbjct 13812 CTCCCACTTATTCTACACCTCTCATGTCTCTTCCCCGTGCCAGACTAGAGTCAAGCTCAA 13753 Query 297 CAGGGTCT 304 |||||||| Sbjct 13752 CAGGGTCT 13745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635071277056