Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq7762 95.1 2e-17 seq7781 91.5 2e-16 seq7771 84.2 4e-14 seq7725 80.6 4e-13 seq7858 73.4 6e-11 seq7822 73.4 6e-11 >seq7762 Length=3345841 Score = 95.1 bits (104), Expect = 2e-17 Identities = 91/114 (80%), Gaps = 2/114 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| | ||||| | | | || |||| || || | Sbjct 14436 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTGTAGGTGCTTGGCTGAGGAGCCAAT 14493 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | || ||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 14494 GGGGCAAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 14547 >seq7781 Length=3670399 Score = 91.5 bits (100), Expect = 2e-16 Identities = 91/114 (80%), Gaps = 3/114 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||| ||||||||||| | |||||| | ||||| | || | || |||| || || | Sbjct 473403 GTAC-AGAGGAACCGCAGG-TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCCAAT 473347 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||||||||||||||| |||||||| |||||||||||||| ||||||||| Sbjct 473346 GGGGCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAATCAGAATCC 473293 >seq7771 Length=57971676 Score = 84.2 bits (92), Expect = 4e-14 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 31 TTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGG 90 ||||| | || | || |||| || || || |||||||||||||||| |||||||| Sbjct 36081597 TTGGTGTATGTGCTTGGCTGAGGAGCCAATGGGGCGAAGCTACCATCTGTGGGATTATGA 36081538 Query 91 CTGAACGCCTCTAAGTCAGAATCC 114 |||||||||||||||||||||||| Sbjct 36081537 CTGAACGCCTCTAAGTCAGAATCC 36081514 >seq7725 Length=84060192 Score = 80.6 bits (88), Expect = 4e-13 Identities = 67/81 (83%), Gaps = 1/81 (1%) Strand=Plus/Minus Query 39 TGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGC 98 || || || |||| || ||||| || ||||||||||||| |||||||| ||||| || Sbjct 76723607 TGTGGTTGGCTGAAGAGCCAGTGGGGCAAAGCTACCATCTGTGGGATTATGACTGAATGC 76723548 Query 99 CTCTAAGTCAGAATCCATGCC 119 |||||||||||||||| |||| Sbjct 76723547 CTCTAAGTCAGAATCC-TGCC 76723528 >seq7858 Length=29646629 Score = 73.4 bits (80), Expect = 6e-11 Identities = 60/72 (83%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 48 CTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTC 107 |||| || || || || ||||||||||||| |||||||| ||||| ||||||||||| Sbjct 844167 CTGAGGAGCCAATGGGGCAAAGCTACCATCTGTGGGATTATGACTGAATGCCTCTAAGTC 844108 Query 108 AGAATCCATGCC 119 ||||||| |||| Sbjct 844107 AGAATCC-TGCC 844097 >seq7822 Length=17051651 Score = 73.4 bits (80), Expect = 6e-11 Identities = 62/75 (83%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 45 TGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAA 104 || |||| || || || ||||||||||||| || |||||||| |||||| ||||||| Sbjct 14777940 TGGCTGAGGAGCCAATGGGGCGAAGCTACCATTTGTGGGATTATGACTGAACACCTCTAA 14777999 Query 105 GTCAGAATCCATGCC 119 |||||||||| |||| Sbjct 14778000 GTCAGAATCC-TGCC 14778013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819137527808