Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq7762 95.1 2e-17
seq7781 91.5 2e-16
seq7771 84.2 4e-14
seq7725 80.6 4e-13
seq7858 73.4 6e-11
seq7822 73.4 6e-11
>seq7762
Length=3345841
Score = 95.1 bits (104), Expect = 2e-17
Identities = 91/114 (80%), Gaps = 2/114 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | ||||| | | | || |||| || || |
Sbjct 14436 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTGTAGGTGCTTGGCTGAGGAGCCAAT 14493
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| || ||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 14494 GGGGCAAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 14547
>seq7781
Length=3670399
Score = 91.5 bits (100), Expect = 2e-16
Identities = 91/114 (80%), Gaps = 3/114 (3%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||| ||||||||||| | |||||| | ||||| | || | || |||| || || |
Sbjct 473403 GTAC-AGAGGAACCGCAGG-TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCCAAT 473347
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||||||||| |||||||| |||||||||||||| |||||||||
Sbjct 473346 GGGGCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAATCAGAATCC 473293
>seq7771
Length=57971676
Score = 84.2 bits (92), Expect = 4e-14
Identities = 69/84 (82%), Gaps = 0/84 (0%)
Strand=Plus/Minus
Query 31 TTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGG 90
||||| | || | || |||| || || || |||||||||||||||| ||||||||
Sbjct 36081597 TTGGTGTATGTGCTTGGCTGAGGAGCCAATGGGGCGAAGCTACCATCTGTGGGATTATGA 36081538
Query 91 CTGAACGCCTCTAAGTCAGAATCC 114
||||||||||||||||||||||||
Sbjct 36081537 CTGAACGCCTCTAAGTCAGAATCC 36081514
>seq7725
Length=84060192
Score = 80.6 bits (88), Expect = 4e-13
Identities = 67/81 (83%), Gaps = 1/81 (1%)
Strand=Plus/Minus
Query 39 TGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGC 98
|| || || |||| || ||||| || ||||||||||||| |||||||| ||||| ||
Sbjct 76723607 TGTGGTTGGCTGAAGAGCCAGTGGGGCAAAGCTACCATCTGTGGGATTATGACTGAATGC 76723548
Query 99 CTCTAAGTCAGAATCCATGCC 119
|||||||||||||||| ||||
Sbjct 76723547 CTCTAAGTCAGAATCC-TGCC 76723528
>seq7858
Length=29646629
Score = 73.4 bits (80), Expect = 6e-11
Identities = 60/72 (83%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 48 CTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTC 107
|||| || || || || ||||||||||||| |||||||| ||||| |||||||||||
Sbjct 844167 CTGAGGAGCCAATGGGGCAAAGCTACCATCTGTGGGATTATGACTGAATGCCTCTAAGTC 844108
Query 108 AGAATCCATGCC 119
||||||| ||||
Sbjct 844107 AGAATCC-TGCC 844097
>seq7822
Length=17051651
Score = 73.4 bits (80), Expect = 6e-11
Identities = 62/75 (83%), Gaps = 1/75 (1%)
Strand=Plus/Plus
Query 45 TGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAA 104
|| |||| || || || ||||||||||||| || |||||||| |||||| |||||||
Sbjct 14777940 TGGCTGAGGAGCCAATGGGGCGAAGCTACCATTTGTGGGATTATGACTGAACACCTCTAA 14777999
Query 105 GTCAGAATCCATGCC 119
|||||||||| ||||
Sbjct 14778000 GTCAGAATCC-TGCC 14778013
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819137527808
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |